Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
ARFGEF3Q5TH69 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARFGEF3Q5TH69 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARFGEF3Q5TH69 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.79■□□□□ 0.6
ARFGEF3Q5TH69 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ARFGEF3Q5TH69 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARFGEF3Q5TH69 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ARFGEF3Q5TH69 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARFGEF3Q5TH69 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.79■□□□□ 0.6
ARFGEF3Q5TH69 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ARFGEF3Q5TH69 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARFGEF3Q5TH69 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARFGEF3Q5TH69 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARFGEF3Q5TH69 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARFGEF3Q5TH69 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARFGEF3Q5TH69 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARFGEF3Q5TH69 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARFGEF3Q5TH69 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARFGEF3Q5TH69 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARFGEF3Q5TH69 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.78■□□□□ 0.6
ARFGEF3Q5TH69 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ARFGEF3Q5TH69 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARFGEF3Q5TH69 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARFGEF3Q5TH69 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARFGEF3Q5TH69 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.78■□□□□ 0.6
ARFGEF3Q5TH69 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.78■□□□□ 0.6
ARFGEF3Q5TH69 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.78■□□□□ 0.6
ARFGEF3Q5TH69 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARFGEF3Q5TH69 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.77■□□□□ 0.6
ARFGEF3Q5TH69 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARFGEF3Q5TH69 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARFGEF3Q5TH69 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARFGEF3Q5TH69 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.77■□□□□ 0.6
ARFGEF3Q5TH69 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARFGEF3Q5TH69 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.77■□□□□ 0.6
ARFGEF3Q5TH69 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.77■□□□□ 0.6
ARFGEF3Q5TH69 KRT18P14-201ENST00000534205 1250 ntBASIC18.77■□□□□ 0.6
ARFGEF3Q5TH69 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARFGEF3Q5TH69 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ARFGEF3Q5TH69 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ARFGEF3Q5TH69 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.77■□□□□ 0.59
ARFGEF3Q5TH69 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ARFGEF3Q5TH69 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.76■□□□□ 0.59
ARFGEF3Q5TH69 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.76■□□□□ 0.59
ARFGEF3Q5TH69 AL354811.1-201ENST00000610286 706 ntBASIC18.76■□□□□ 0.59
ARFGEF3Q5TH69 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ARFGEF3Q5TH69 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARFGEF3Q5TH69 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARFGEF3Q5TH69 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARFGEF3Q5TH69 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ARFGEF3Q5TH69 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARFGEF3Q5TH69 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARFGEF3Q5TH69 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ARFGEF3Q5TH69 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.76■□□□□ 0.59
ARFGEF3Q5TH69 YBX1P1-201ENST00000445822 960 ntBASIC18.76■□□□□ 0.59
ARFGEF3Q5TH69 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.76■□□□□ 0.59
ARFGEF3Q5TH69 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
ARFGEF3Q5TH69 AC092666.2-201ENST00000613287 246 ntBASIC18.76■□□□□ 0.59
ARFGEF3Q5TH69 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARFGEF3Q5TH69 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARFGEF3Q5TH69 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.76■□□□□ 0.59
ARFGEF3Q5TH69 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.75■□□□□ 0.59
ARFGEF3Q5TH69 IKBKGP1-201ENST00000612193 1073 ntBASIC18.75■□□□□ 0.59
ARFGEF3Q5TH69 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ARFGEF3Q5TH69 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ARFGEF3Q5TH69 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.75■□□□□ 0.59
ARFGEF3Q5TH69 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ARFGEF3Q5TH69 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ARFGEF3Q5TH69 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.75■□□□□ 0.59
ARFGEF3Q5TH69 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
ARFGEF3Q5TH69 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ARFGEF3Q5TH69 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ARFGEF3Q5TH69 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARFGEF3Q5TH69 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARFGEF3Q5TH69 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
ARFGEF3Q5TH69 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.74■□□□□ 0.59
ARFGEF3Q5TH69 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARFGEF3Q5TH69 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.74■□□□□ 0.59
ARFGEF3Q5TH69 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ARFGEF3Q5TH69 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ARFGEF3Q5TH69 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.74■□□□□ 0.59
ARFGEF3Q5TH69 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.74■□□□□ 0.59
ARFGEF3Q5TH69 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.74■□□□□ 0.59
ARFGEF3Q5TH69 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARFGEF3Q5TH69 AL353803.4-201ENST00000565882 1934 ntBASIC18.73■□□□□ 0.59
ARFGEF3Q5TH69 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARFGEF3Q5TH69 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.73■□□□□ 0.59
ARFGEF3Q5TH69 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ARFGEF3Q5TH69 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARFGEF3Q5TH69 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.73■□□□□ 0.59
ARFGEF3Q5TH69 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ARFGEF3Q5TH69 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARFGEF3Q5TH69 KRT18P5-201ENST00000436075 1291 ntBASIC18.73■□□□□ 0.59
ARFGEF3Q5TH69 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ARFGEF3Q5TH69 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARFGEF3Q5TH69 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARFGEF3Q5TH69 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ARFGEF3Q5TH69 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARFGEF3Q5TH69 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ARFGEF3Q5TH69 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms