Protein–RNA interactions for Protein: Q5T2W1

PDZK1, Na(+)/H(+) exchange regulatory cofactor NHE-RF3, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZK1Q5T2W1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDZK1Q5T2W1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PDZK1Q5T2W1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PDZK1Q5T2W1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.55■□□□□ 0.88
PDZK1Q5T2W1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.55■□□□□ 0.88
PDZK1Q5T2W1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.55■□□□□ 0.88
PDZK1Q5T2W1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.55■□□□□ 0.88
PDZK1Q5T2W1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDZK1Q5T2W1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDZK1Q5T2W1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.55■□□□□ 0.88
PDZK1Q5T2W1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PDZK1Q5T2W1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDZK1Q5T2W1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDZK1Q5T2W1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PDZK1Q5T2W1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PDZK1Q5T2W1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDZK1Q5T2W1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDZK1Q5T2W1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.54■□□□□ 0.88
PDZK1Q5T2W1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDZK1Q5T2W1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDZK1Q5T2W1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDZK1Q5T2W1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDZK1Q5T2W1 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.54■□□□□ 0.88
PDZK1Q5T2W1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.54■□□□□ 0.88
PDZK1Q5T2W1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.54■□□□□ 0.88
PDZK1Q5T2W1 LINC00565-201ENST00000562710 2331 ntBASIC20.54■□□□□ 0.88
PDZK1Q5T2W1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDZK1Q5T2W1 C1orf229-201ENST00000623686 2258 ntBASIC20.53■□□□□ 0.88
PDZK1Q5T2W1 LINC01529-204ENST00000636474 1715 ntBASIC20.53■□□□□ 0.88
PDZK1Q5T2W1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDZK1Q5T2W1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDZK1Q5T2W1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PDZK1Q5T2W1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
PDZK1Q5T2W1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.53■□□□□ 0.88
PDZK1Q5T2W1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.53■□□□□ 0.88
PDZK1Q5T2W1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDZK1Q5T2W1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.53■□□□□ 0.88
PDZK1Q5T2W1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.53■□□□□ 0.88
PDZK1Q5T2W1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.53■□□□□ 0.88
PDZK1Q5T2W1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDZK1Q5T2W1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PDZK1Q5T2W1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDZK1Q5T2W1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDZK1Q5T2W1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.52■□□□□ 0.88
PDZK1Q5T2W1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDZK1Q5T2W1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PDZK1Q5T2W1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDZK1Q5T2W1 FP325331.1-202ENST00000623531 1380 ntBASIC20.52■□□□□ 0.88
PDZK1Q5T2W1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDZK1Q5T2W1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PDZK1Q5T2W1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PDZK1Q5T2W1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.52■□□□□ 0.88
PDZK1Q5T2W1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.52■□□□□ 0.88
PDZK1Q5T2W1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.52■□□□□ 0.88
PDZK1Q5T2W1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PDZK1Q5T2W1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDZK1Q5T2W1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDZK1Q5T2W1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDZK1Q5T2W1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDZK1Q5T2W1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.51■□□□□ 0.87
PDZK1Q5T2W1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDZK1Q5T2W1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.51■□□□□ 0.87
PDZK1Q5T2W1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.51■□□□□ 0.87
PDZK1Q5T2W1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.51■□□□□ 0.87
PDZK1Q5T2W1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.51■□□□□ 0.87
PDZK1Q5T2W1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDZK1Q5T2W1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.51■□□□□ 0.87
PDZK1Q5T2W1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDZK1Q5T2W1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDZK1Q5T2W1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDZK1Q5T2W1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
PDZK1Q5T2W1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDZK1Q5T2W1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDZK1Q5T2W1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDZK1Q5T2W1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.5■□□□□ 0.87
PDZK1Q5T2W1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PDZK1Q5T2W1 C17orf82-201ENST00000623772 1530 ntBASIC20.5■□□□□ 0.87
PDZK1Q5T2W1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDZK1Q5T2W1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.5■□□□□ 0.87
PDZK1Q5T2W1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDZK1Q5T2W1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.5■□□□□ 0.87
PDZK1Q5T2W1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDZK1Q5T2W1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDZK1Q5T2W1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PDZK1Q5T2W1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PDZK1Q5T2W1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDZK1Q5T2W1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.5■□□□□ 0.87
PDZK1Q5T2W1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDZK1Q5T2W1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.49■□□□□ 0.87
PDZK1Q5T2W1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDZK1Q5T2W1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDZK1Q5T2W1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.49■□□□□ 0.87
PDZK1Q5T2W1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.49■□□□□ 0.87
PDZK1Q5T2W1 AL117332.1-201ENST00000622628 974 ntBASIC20.49■□□□□ 0.87
PDZK1Q5T2W1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDZK1Q5T2W1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDZK1Q5T2W1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDZK1Q5T2W1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDZK1Q5T2W1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.49■□□□□ 0.87
PDZK1Q5T2W1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms