Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.99■□□□□ 0.79
RNFT1Q5M7Z0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.99■□□□□ 0.79
RNFT1Q5M7Z0 AC105233.4-201ENST00000642045 216 ntBASIC19.99■□□□□ 0.79
RNFT1Q5M7Z0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNFT1Q5M7Z0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.99■□□□□ 0.79
RNFT1Q5M7Z0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNFT1Q5M7Z0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RNFT1Q5M7Z0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
RNFT1Q5M7Z0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNFT1Q5M7Z0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNFT1Q5M7Z0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNFT1Q5M7Z0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
RNFT1Q5M7Z0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNFT1Q5M7Z0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RNFT1Q5M7Z0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.98■□□□□ 0.79
RNFT1Q5M7Z0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNFT1Q5M7Z0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
RNFT1Q5M7Z0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RNFT1Q5M7Z0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNFT1Q5M7Z0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.97■□□□□ 0.79
RNFT1Q5M7Z0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RNFT1Q5M7Z0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNFT1Q5M7Z0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.97■□□□□ 0.79
RNFT1Q5M7Z0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNFT1Q5M7Z0 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.97■□□□□ 0.79
RNFT1Q5M7Z0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.97■□□□□ 0.79
RNFT1Q5M7Z0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.97■□□□□ 0.79
RNFT1Q5M7Z0 TERF1P2-201ENST00000583350 1212 ntBASIC19.97■□□□□ 0.79
RNFT1Q5M7Z0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNFT1Q5M7Z0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNFT1Q5M7Z0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.97■□□□□ 0.79
RNFT1Q5M7Z0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNFT1Q5M7Z0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.96■□□□□ 0.79
RNFT1Q5M7Z0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RNFT1Q5M7Z0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNFT1Q5M7Z0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNFT1Q5M7Z0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNFT1Q5M7Z0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNFT1Q5M7Z0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RNFT1Q5M7Z0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.96■□□□□ 0.79
RNFT1Q5M7Z0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNFT1Q5M7Z0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.96■□□□□ 0.79
RNFT1Q5M7Z0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.96■□□□□ 0.79
RNFT1Q5M7Z0 KRT18P14-201ENST00000534205 1250 ntBASIC19.96■□□□□ 0.79
RNFT1Q5M7Z0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.96■□□□□ 0.79
RNFT1Q5M7Z0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNFT1Q5M7Z0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RNFT1Q5M7Z0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNFT1Q5M7Z0 AC092437.1-201ENST00000624794 1048 ntBASIC19.96■□□□□ 0.79
RNFT1Q5M7Z0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNFT1Q5M7Z0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.96■□□□□ 0.79
RNFT1Q5M7Z0 LINC02228-203ENST00000641970 1355 ntBASIC19.95■□□□□ 0.79
RNFT1Q5M7Z0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RNFT1Q5M7Z0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNFT1Q5M7Z0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNFT1Q5M7Z0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RNFT1Q5M7Z0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNFT1Q5M7Z0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNFT1Q5M7Z0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNFT1Q5M7Z0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNFT1Q5M7Z0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNFT1Q5M7Z0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
RNFT1Q5M7Z0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.95■□□□□ 0.78
RNFT1Q5M7Z0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.95■□□□□ 0.78
RNFT1Q5M7Z0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RNFT1Q5M7Z0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNFT1Q5M7Z0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.95■□□□□ 0.78
RNFT1Q5M7Z0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.95■□□□□ 0.78
RNFT1Q5M7Z0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.95■□□□□ 0.78
RNFT1Q5M7Z0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNFT1Q5M7Z0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNFT1Q5M7Z0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.95■□□□□ 0.78
RNFT1Q5M7Z0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNFT1Q5M7Z0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNFT1Q5M7Z0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNFT1Q5M7Z0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RNFT1Q5M7Z0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.94■□□□□ 0.78
RNFT1Q5M7Z0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.94■□□□□ 0.78
RNFT1Q5M7Z0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.94■□□□□ 0.78
RNFT1Q5M7Z0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.94■□□□□ 0.78
RNFT1Q5M7Z0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.94■□□□□ 0.78
RNFT1Q5M7Z0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.94■□□□□ 0.78
RNFT1Q5M7Z0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.94■□□□□ 0.78
RNFT1Q5M7Z0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNFT1Q5M7Z0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RNFT1Q5M7Z0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNFT1Q5M7Z0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNFT1Q5M7Z0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNFT1Q5M7Z0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNFT1Q5M7Z0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.93■□□□□ 0.78
RNFT1Q5M7Z0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNFT1Q5M7Z0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.93■□□□□ 0.78
RNFT1Q5M7Z0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNFT1Q5M7Z0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNFT1Q5M7Z0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNFT1Q5M7Z0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.92■□□□□ 0.78
RNFT1Q5M7Z0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.92■□□□□ 0.78
RNFT1Q5M7Z0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNFT1Q5M7Z0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.92■□□□□ 0.78
RNFT1Q5M7Z0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms