Protein–RNA interactions for Protein: Q38SD2

LRRK1, Leucine-rich repeat serine/threonine-protein kinase 1, humanhuman

Predictions only

Length 2,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1Q38SD2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRRK1Q38SD2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRRK1Q38SD2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRRK1Q38SD2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
LRRK1Q38SD2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRRK1Q38SD2 AC034268.1-201ENST00000441047 882 ntBASIC21.95■■□□□ 1.1
LRRK1Q38SD2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.95■■□□□ 1.1
LRRK1Q38SD2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
LRRK1Q38SD2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
LRRK1Q38SD2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRRK1Q38SD2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.94■■□□□ 1.1
LRRK1Q38SD2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.94■■□□□ 1.1
LRRK1Q38SD2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
LRRK1Q38SD2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRK1Q38SD2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.94■■□□□ 1.1
LRRK1Q38SD2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRK1Q38SD2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRK1Q38SD2 LINC01960-201ENST00000563759 1884 ntBASIC21.94■■□□□ 1.1
LRRK1Q38SD2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRK1Q38SD2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LRRK1Q38SD2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LRRK1Q38SD2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LRRK1Q38SD2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
LRRK1Q38SD2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.94■■□□□ 1.1
LRRK1Q38SD2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRK1Q38SD2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
LRRK1Q38SD2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.93■■□□□ 1.1
LRRK1Q38SD2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRRK1Q38SD2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRRK1Q38SD2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRRK1Q38SD2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
LRRK1Q38SD2 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.93■■□□□ 1.1
LRRK1Q38SD2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRRK1Q38SD2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.92■■□□□ 1.1
LRRK1Q38SD2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRK1Q38SD2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
LRRK1Q38SD2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
LRRK1Q38SD2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
LRRK1Q38SD2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.92■■□□□ 1.1
LRRK1Q38SD2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.92■■□□□ 1.1
LRRK1Q38SD2 AL031602.1-201ENST00000633169 911 ntBASIC21.92■■□□□ 1.1
LRRK1Q38SD2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRK1Q38SD2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LRRK1Q38SD2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRK1Q38SD2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LRRK1Q38SD2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRK1Q38SD2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.92■■□□□ 1.1
LRRK1Q38SD2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRK1Q38SD2 AC097381.1-201ENST00000429019 1296 ntBASIC21.92■■□□□ 1.1
LRRK1Q38SD2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRK1Q38SD2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.91■■□□□ 1.1
LRRK1Q38SD2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRK1Q38SD2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.91■■□□□ 1.1
LRRK1Q38SD2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.91■■□□□ 1.1
LRRK1Q38SD2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRK1Q38SD2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LRRK1Q38SD2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRK1Q38SD2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.91■■□□□ 1.1
LRRK1Q38SD2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRK1Q38SD2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRK1Q38SD2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.9■■□□□ 1.1
LRRK1Q38SD2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.9■■□□□ 1.1
LRRK1Q38SD2 AC087239.1-201ENST00000622671 572 ntBASIC21.9■■□□□ 1.1
LRRK1Q38SD2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRK1Q38SD2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRK1Q38SD2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.9■■□□□ 1.1
LRRK1Q38SD2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.9■■□□□ 1.1
LRRK1Q38SD2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRK1Q38SD2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
LRRK1Q38SD2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LRRK1Q38SD2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.1
LRRK1Q38SD2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LRRK1Q38SD2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
LRRK1Q38SD2 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.89■■□□□ 1.1
LRRK1Q38SD2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.89■■□□□ 1.1
LRRK1Q38SD2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.89■■□□□ 1.09
LRRK1Q38SD2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LRRK1Q38SD2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
LRRK1Q38SD2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.89■■□□□ 1.09
LRRK1Q38SD2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.89■■□□□ 1.09
LRRK1Q38SD2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRK1Q38SD2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRK1Q38SD2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LRRK1Q38SD2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRK1Q38SD2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
LRRK1Q38SD2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRK1Q38SD2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LRRK1Q38SD2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LRRK1Q38SD2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
LRRK1Q38SD2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.88■■□□□ 1.09
LRRK1Q38SD2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRK1Q38SD2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRK1Q38SD2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
LRRK1Q38SD2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.87■■□□□ 1.09
LRRK1Q38SD2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.87■■□□□ 1.09
LRRK1Q38SD2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRRK1Q38SD2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.87■■□□□ 1.09
LRRK1Q38SD2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.87■■□□□ 1.09
LRRK1Q38SD2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.87■■□□□ 1.09
LRRK1Q38SD2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms