Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 PER33YLR064W 822 nt3.3□□□□□ -1.88
HRD1Q08109 NIS1YNL078W 1224 nt3.3□□□□□ -1.88
HRD1Q08109 IBD2YNL164C 1056 nt3.3□□□□□ -1.88
HRD1Q08109 RRP36YOR287C 903 nt3.3□□□□□ -1.88
HRD1Q08109 PEP4YPL154C 1218 nt3.3□□□□□ -1.88
HRD1Q08109 YAR1YPL239W 603 nt3.3□□□□□ -1.88
HRD1Q08109 GZF3YJL110C 1656 nt3.3□□□□□ -1.88
HRD1Q08109 RNT1YMR239C 1416 nt3.29□□□□□ -1.88
HRD1Q08109 PEX1YKL197C 3132 nt3.29□□□□□ -1.88
HRD1Q08109 SAS10YDL153C 1833 nt3.29□□□□□ -1.88
HRD1Q08109 AZR1YGR224W 1842 nt3.29□□□□□ -1.88
HRD1Q08109 UBC1YDR177W 648 nt3.29□□□□□ -1.88
HRD1Q08109 YGR126WYGR126W 693 nt3.29□□□□□ -1.88
HRD1Q08109 REC104YHR157W 549 nt3.29□□□□□ -1.88
HRD1Q08109 RPS4BYHR203C 786 nt3.29□□□□□ -1.88
HRD1Q08109 RPS4AYJR145C 786 nt3.29□□□□□ -1.88
HRD1Q08109 YLR036CYLR036C 612 nt3.29□□□□□ -1.88
HRD1Q08109 YLR122CYLR122C 378 nt3.29□□□□□ -1.88
HRD1Q08109 YNR061CYNR061C 660 nt3.29□□□□□ -1.88
HRD1Q08109 SLX1YBR228W 915 nt3.29□□□□□ -1.88
HRD1Q08109 LAP2YNL045W 2016 nt3.29□□□□□ -1.88
HRD1Q08109 ATG21YPL100W 1491 nt3.28□□□□□ -1.88
HRD1Q08109 SEC2YNL272C 2280 nt3.28□□□□□ -1.88
HRD1Q08109 CWH43YCR017C 2862 nt3.28□□□□□ -1.88
HRD1Q08109 ARO80YDR421W 2853 nt3.28□□□□□ -1.88
HRD1Q08109 YDR464C-AYDR464C-A 189 nt3.28□□□□□ -1.88
HRD1Q08109 YER034WYER034W 558 nt3.28□□□□□ -1.88
HRD1Q08109 CAF16YFL028C 870 nt3.28□□□□□ -1.88
HRD1Q08109 YGL108CYGL108C 423 nt3.28□□□□□ -1.88
HRD1Q08109 YLL017WYLL017W 312 nt3.28□□□□□ -1.88
HRD1Q08109 GAT3YLR013W 426 nt3.28□□□□□ -1.88
HRD1Q08109 ELO3YLR372W 1038 nt3.28□□□□□ -1.88
HRD1Q08109 REC114YMR133W 1287 nt3.28□□□□□ -1.88
HRD1Q08109 YPL088WYPL088W 1029 nt3.28□□□□□ -1.88
HRD1Q08109 EKI1YDR147W 1605 nt3.28□□□□□ -1.88
HRD1Q08109 KIN2YLR096W 3444 nt3.28□□□□□ -1.88
HRD1Q08109 FKH1YIL131C 1455 nt3.28□□□□□ -1.88
HRD1Q08109 MAL13YGR288W 1422 nt3.27□□□□□ -1.89
HRD1Q08109 PMT6YGR199W 2280 nt3.27□□□□□ -1.89
HRD1Q08109 KAP95YLR347C 2586 nt3.27□□□□□ -1.89
HRD1Q08109 YCR050CYCR050C 309 nt3.27□□□□□ -1.89
HRD1Q08109 YER067C-AYER067C-A 324 nt3.27□□□□□ -1.89
HRD1Q08109 MIC26YGR235C 702 nt3.27□□□□□ -1.89
HRD1Q08109 HIS6YIL020C 786 nt3.27□□□□□ -1.89
HRD1Q08109 MRP8YKL142W 660 nt3.27□□□□□ -1.89
HRD1Q08109 RPS0BYLR048W 759 nt3.27□□□□□ -1.89
HRD1Q08109 YBL036CYBL036C 774 nt3.27□□□□□ -1.89
HRD1Q08109 PNG1YPL096W 1092 nt3.27□□□□□ -1.89
HRD1Q08109 BUD27YFL023W 2391 nt3.26□□□□□ -1.89
HRD1Q08109 YOL075CYOL075C 3885 nt3.26□□□□□ -1.89
HRD1Q08109 SPT4YGR063C 309 nt3.26□□□□□ -1.89
HRD1Q08109 RPB3YIL021W 957 nt3.26□□□□□ -1.89
HRD1Q08109 PIR3YKL163W 978 nt3.26□□□□□ -1.89
HRD1Q08109 MRPL3YMR024W 1173 nt3.26□□□□□ -1.89
HRD1Q08109 YGK3YOL128C 1128 nt3.26□□□□□ -1.89
HRD1Q08109 YOR131CYOR131C 657 nt3.26□□□□□ -1.89
HRD1Q08109 OAZ1YPL052W 879 nt3.26□□□□□ -1.89
HRD1Q08109 USA1YML029W 2517 nt3.26□□□□□ -1.89
HRD1Q08109 MLH2YLR035C 2088 nt3.26□□□□□ -1.89
HRD1Q08109 SWH1YAR042W 3567 nt3.26□□□□□ -1.89
HRD1Q08109 SUC2YIL162W 1599 nt3.25□□□□□ -1.89
HRD1Q08109 FRT2YAL028W 1587 nt3.25□□□□□ -1.89
HRD1Q08109 YHL026CYHL026C 948 nt3.25□□□□□ -1.89
HRD1Q08109 YIL152WYIL152W 708 nt3.25□□□□□ -1.89
HRD1Q08109 SOP4YJL192C 705 nt3.25□□□□□ -1.89
HRD1Q08109 SEA4YBL104C 3117 nt3.25□□□□□ -1.89
HRD1Q08109 MNT4YNR059W 1743 nt3.24□□□□□ -1.89
HRD1Q08109 YKT6YKL196C 603 nt3.24□□□□□ -1.89
HRD1Q08109 REH1YLR387C 1299 nt3.24□□□□□ -1.89
HRD1Q08109 ASC1YMR116C 960 nt3.24□□□□□ -1.89
HRD1Q08109 RPL15BYMR121C 615 nt3.24□□□□□ -1.89
HRD1Q08109 YNL057WYNL057W 333 nt3.24□□□□□ -1.89
HRD1Q08109 EOS1YNL080C 1101 nt3.24□□□□□ -1.89
HRD1Q08109 RPL18AYOL120C 561 nt3.24□□□□□ -1.89
HRD1Q08109 GLO4YOR040W 858 nt3.24□□□□□ -1.89
HRD1Q08109 PZF1YPR186C 1290 nt3.24□□□□□ -1.89
HRD1Q08109 BYE1YKL005C 1785 nt3.24□□□□□ -1.89
HRD1Q08109 DIT2YDR402C 1470 nt3.23□□□□□ -1.89
HRD1Q08109 HSP30YCR021C 999 nt3.23□□□□□ -1.89
HRD1Q08109 PHO87YCR037C 2772 nt3.23□□□□□ -1.89
HRD1Q08109 VFA1YER128W 612 nt3.23□□□□□ -1.89
HRD1Q08109 YML053CYML053C 639 nt3.23□□□□□ -1.89
HRD1Q08109 SYT1YPR095C 3681 nt3.22□□□□□ -1.89
HRD1Q08109 SIP1YDR422C 2448 nt3.22□□□□□ -1.89
HRD1Q08109 YJR096WYJR096W 849 nt3.22□□□□□ -1.89
HRD1Q08109 SOD1YJR104C 465 nt3.22□□□□□ -1.89
HRD1Q08109 ROK1YGL171W 1695 nt3.22□□□□□ -1.89
HRD1Q08109 YLR345WYLR345W 1530 nt3.22□□□□□ -1.89
HRD1Q08109 YLR177WYLR177W 1887 nt3.22□□□□□ -1.89
HRD1Q08109 RGP1YDR137W 1992 nt3.21□□□□□ -1.89
HRD1Q08109 ELM1YKL048C 1923 nt3.21□□□□□ -1.9
HRD1Q08109 PRP40YKL012W 1752 nt3.21□□□□□ -1.9
HRD1Q08109 VAC17YCL063W 1272 nt3.21□□□□□ -1.9
HRD1Q08109 YDL228CYDL228C 642 nt3.21□□□□□ -1.9
HRD1Q08109 HOM2YDR158W 1098 nt3.21□□□□□ -1.9
HRD1Q08109 YGR011WYGR011W 327 nt3.21□□□□□ -1.9
HRD1Q08109 AIR1YIL079C 1083 nt3.21□□□□□ -1.9
HRD1Q08109 YLR154W-BYLR154W-B 165 nt3.21□□□□□ -1.9
HRD1Q08109 YML116W-AYML116W-A 303 nt3.21□□□□□ -1.9
HRD1Q08109 TVP18YMR071C 504 nt3.21□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 16.4 ms