Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCL20P78556 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL20P78556 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCL20P78556 AC007952.6-201ENST00000573168 2673 ntBASIC17.39■□□□□ 0.37
CCL20P78556 AC003957.1-201ENST00000625108 2673 ntBASIC17.39■□□□□ 0.37
CCL20P78556 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCL20P78556 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCL20P78556 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.39■□□□□ 0.37
CCL20P78556 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CCL20P78556 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL20P78556 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL20P78556 AL022069.1-201ENST00000568025 1636 ntBASIC17.39■□□□□ 0.37
CCL20P78556 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.38■□□□□ 0.37
CCL20P78556 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL20P78556 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL20P78556 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCL20P78556 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.38■□□□□ 0.37
CCL20P78556 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.38■□□□□ 0.37
CCL20P78556 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCL20P78556 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCL20P78556 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL20P78556 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL20P78556 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.38■□□□□ 0.37
CCL20P78556 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCL20P78556 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL20P78556 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL20P78556 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCL20P78556 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.37■□□□□ 0.37
CCL20P78556 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.37■□□□□ 0.37
CCL20P78556 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CCL20P78556 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CCL20P78556 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL20P78556 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCL20P78556 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL20P78556 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCL20P78556 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCL20P78556 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.36■□□□□ 0.37
CCL20P78556 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL20P78556 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CCL20P78556 AL353803.4-201ENST00000565882 1934 ntBASIC17.36■□□□□ 0.37
CCL20P78556 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.36■□□□□ 0.37
CCL20P78556 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL20P78556 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL20P78556 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL20P78556 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCL20P78556 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCL20P78556 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL20P78556 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCL20P78556 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL20P78556 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCL20P78556 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CCL20P78556 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL20P78556 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.35■□□□□ 0.37
CCL20P78556 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL20P78556 AF106564.1-201ENST00000607058 2553 ntBASIC17.35■□□□□ 0.37
CCL20P78556 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL20P78556 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCL20P78556 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCL20P78556 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CCL20P78556 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.35■□□□□ 0.37
CCL20P78556 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL20P78556 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL20P78556 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL20P78556 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.35■□□□□ 0.37
CCL20P78556 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCL20P78556 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL20P78556 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL20P78556 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.35■□□□□ 0.37
CCL20P78556 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL20P78556 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL20P78556 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.34■□□□□ 0.37
CCL20P78556 KRT18P10-201ENST00000388836 1287 ntBASIC17.34■□□□□ 0.37
CCL20P78556 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL20P78556 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCL20P78556 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.34■□□□□ 0.37
CCL20P78556 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCL20P78556 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.34■□□□□ 0.37
CCL20P78556 AC244015.2-201ENST00000616358 1861 ntBASIC17.34■□□□□ 0.37
CCL20P78556 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CCL20P78556 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CCL20P78556 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CCL20P78556 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCL20P78556 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL20P78556 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL20P78556 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCL20P78556 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCL20P78556 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCL20P78556 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCL20P78556 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.33■□□□□ 0.37
CCL20P78556 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CCL20P78556 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCL20P78556 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCL20P78556 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.33■□□□□ 0.36
CCL20P78556 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCL20P78556 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCL20P78556 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CCL20P78556 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCL20P78556 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCL20P78556 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL20P78556 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms