Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.38■□□□□ 0.69
LSM6P62312 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.38■□□□□ 0.69
LSM6P62312 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LSM6P62312 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM6P62312 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.38■□□□□ 0.69
LSM6P62312 AC004687.1-201ENST00000579003 1625 ntBASIC19.38■□□□□ 0.69
LSM6P62312 AC242852.2-201ENST00000615738 1807 ntBASIC19.38■□□□□ 0.69
LSM6P62312 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LSM6P62312 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSM6P62312 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSM6P62312 AC087742.1-201ENST00000575880 1738 ntBASIC19.37■□□□□ 0.69
LSM6P62312 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSM6P62312 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSM6P62312 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.37■□□□□ 0.69
LSM6P62312 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSM6P62312 CLDN5-201ENST00000403084 2357 ntBASIC19.36■□□□□ 0.69
LSM6P62312 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSM6P62312 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSM6P62312 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSM6P62312 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.36■□□□□ 0.69
LSM6P62312 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.36■□□□□ 0.69
LSM6P62312 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.36■□□□□ 0.69
LSM6P62312 AC092171.4-201ENST00000609130 632 ntBASIC19.36■□□□□ 0.69
LSM6P62312 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LSM6P62312 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.36■□□□□ 0.69
LSM6P62312 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSM6P62312 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSM6P62312 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.36■□□□□ 0.69
LSM6P62312 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
LSM6P62312 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.36■□□□□ 0.69
LSM6P62312 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LSM6P62312 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
LSM6P62312 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSM6P62312 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.35■□□□□ 0.69
LSM6P62312 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSM6P62312 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.35■□□□□ 0.69
LSM6P62312 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.35■□□□□ 0.69
LSM6P62312 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.35■□□□□ 0.69
LSM6P62312 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.35■□□□□ 0.69
LSM6P62312 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.35■□□□□ 0.69
LSM6P62312 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LSM6P62312 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSM6P62312 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LSM6P62312 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSM6P62312 LINC01960-201ENST00000563759 1884 ntBASIC19.35■□□□□ 0.69
LSM6P62312 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSM6P62312 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.34■□□□□ 0.69
LSM6P62312 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LSM6P62312 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LSM6P62312 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSM6P62312 SRD5A1P1-201ENST00000442297 786 ntBASIC19.34■□□□□ 0.69
LSM6P62312 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.34■□□□□ 0.69
LSM6P62312 AL512631.2-201ENST00000604634 923 ntBASIC19.34■□□□□ 0.69
LSM6P62312 AC099791.2-201ENST00000605725 427 ntBASIC19.34■□□□□ 0.69
LSM6P62312 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.34■□□□□ 0.69
LSM6P62312 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSM6P62312 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LSM6P62312 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LSM6P62312 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.34■□□□□ 0.69
LSM6P62312 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.34■□□□□ 0.69
LSM6P62312 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LSM6P62312 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSM6P62312 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSM6P62312 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LSM6P62312 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
LSM6P62312 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.33■□□□□ 0.69
LSM6P62312 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LSM6P62312 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.33■□□□□ 0.68
LSM6P62312 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LSM6P62312 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
LSM6P62312 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSM6P62312 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.33■□□□□ 0.68
LSM6P62312 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.33■□□□□ 0.68
LSM6P62312 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSM6P62312 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
LSM6P62312 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSM6P62312 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSM6P62312 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSM6P62312 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
LSM6P62312 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM6P62312 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.32■□□□□ 0.68
LSM6P62312 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LSM6P62312 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LSM6P62312 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.32■□□□□ 0.68
LSM6P62312 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.32■□□□□ 0.68
LSM6P62312 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM6P62312 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM6P62312 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.32■□□□□ 0.68
LSM6P62312 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM6P62312 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.32■□□□□ 0.68
LSM6P62312 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM6P62312 LINC00526-201ENST00000581067 1875 ntBASIC19.32■□□□□ 0.68
LSM6P62312 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LSM6P62312 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
LSM6P62312 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.32■□□□□ 0.68
LSM6P62312 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM6P62312 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LSM6P62312 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM6P62312 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM6P62312 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms