Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VBP1P61758 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
VBP1P61758 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.78■□□□□ 0.76
VBP1P61758 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.78■□□□□ 0.76
VBP1P61758 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.78■□□□□ 0.76
VBP1P61758 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
VBP1P61758 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VBP1P61758 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
VBP1P61758 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.78■□□□□ 0.76
VBP1P61758 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
VBP1P61758 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VBP1P61758 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VBP1P61758 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.78■□□□□ 0.76
VBP1P61758 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VBP1P61758 AC087742.1-201ENST00000575880 1738 ntBASIC19.77■□□□□ 0.76
VBP1P61758 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
VBP1P61758 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VBP1P61758 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VBP1P61758 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
VBP1P61758 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VBP1P61758 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.77■□□□□ 0.76
VBP1P61758 ALDH1A3-203ENST00000557963 1670 ntBASIC19.77■□□□□ 0.76
VBP1P61758 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VBP1P61758 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.77■□□□□ 0.76
VBP1P61758 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
VBP1P61758 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
VBP1P61758 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
VBP1P61758 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.76■□□□□ 0.75
VBP1P61758 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.76■□□□□ 0.75
VBP1P61758 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.76■□□□□ 0.75
VBP1P61758 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VBP1P61758 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VBP1P61758 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VBP1P61758 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
VBP1P61758 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.76■□□□□ 0.75
VBP1P61758 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
VBP1P61758 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.76■□□□□ 0.75
VBP1P61758 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.76■□□□□ 0.75
VBP1P61758 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
VBP1P61758 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
VBP1P61758 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VBP1P61758 AL022069.1-201ENST00000568025 1636 ntBASIC19.76■□□□□ 0.75
VBP1P61758 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VBP1P61758 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VBP1P61758 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.75■□□□□ 0.75
VBP1P61758 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VBP1P61758 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VBP1P61758 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VBP1P61758 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.75■□□□□ 0.75
VBP1P61758 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VBP1P61758 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VBP1P61758 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
VBP1P61758 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VBP1P61758 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.74■□□□□ 0.75
VBP1P61758 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VBP1P61758 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
VBP1P61758 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
VBP1P61758 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VBP1P61758 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
VBP1P61758 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
VBP1P61758 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VBP1P61758 KRT18P10-201ENST00000388836 1287 ntBASIC19.73■□□□□ 0.75
VBP1P61758 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VBP1P61758 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VBP1P61758 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.73■□□□□ 0.75
VBP1P61758 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VBP1P61758 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VBP1P61758 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VBP1P61758 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.72■□□□□ 0.75
VBP1P61758 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.72■□□□□ 0.75
VBP1P61758 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VBP1P61758 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VBP1P61758 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VBP1P61758 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VBP1P61758 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VBP1P61758 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
VBP1P61758 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VBP1P61758 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VBP1P61758 LINC01521-201ENST00000504184 1943 ntBASIC19.72■□□□□ 0.75
VBP1P61758 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VBP1P61758 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VBP1P61758 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
VBP1P61758 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
VBP1P61758 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VBP1P61758 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VBP1P61758 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VBP1P61758 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.71■□□□□ 0.75
VBP1P61758 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.71■□□□□ 0.75
VBP1P61758 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.71■□□□□ 0.75
VBP1P61758 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VBP1P61758 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
VBP1P61758 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VBP1P61758 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VBP1P61758 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VBP1P61758 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
VBP1P61758 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
VBP1P61758 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.7■□□□□ 0.74
VBP1P61758 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VBP1P61758 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VBP1P61758 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms