Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.32■□□□□ 0.84
SMIM11AP58511 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SMIM11AP58511 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.32■□□□□ 0.84
SMIM11AP58511 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM11AP58511 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM11AP58511 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM11AP58511 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.32■□□□□ 0.84
SMIM11AP58511 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
SMIM11AP58511 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
SMIM11AP58511 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM11AP58511 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.32■□□□□ 0.84
SMIM11AP58511 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.31■□□□□ 0.84
SMIM11AP58511 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM11AP58511 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM11AP58511 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM11AP58511 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.31■□□□□ 0.84
SMIM11AP58511 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.31■□□□□ 0.84
SMIM11AP58511 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM11AP58511 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.31■□□□□ 0.84
SMIM11AP58511 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.31■□□□□ 0.84
SMIM11AP58511 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM11AP58511 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM11AP58511 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM11AP58511 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SMIM11AP58511 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM11AP58511 AC080038.3-201ENST00000623346 1952 ntBASIC20.3■□□□□ 0.84
SMIM11AP58511 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SMIM11AP58511 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM11AP58511 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SMIM11AP58511 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM11AP58511 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SMIM11AP58511 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM11AP58511 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM11AP58511 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.29■□□□□ 0.84
SMIM11AP58511 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM11AP58511 AC005703.6-201ENST00000623265 1329 ntBASIC20.29■□□□□ 0.84
SMIM11AP58511 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.29■□□□□ 0.84
SMIM11AP58511 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM11AP58511 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SMIM11AP58511 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM11AP58511 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM11AP58511 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
SMIM11AP58511 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.28■□□□□ 0.84
SMIM11AP58511 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SMIM11AP58511 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM11AP58511 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM11AP58511 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMIM11AP58511 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.28■□□□□ 0.84
SMIM11AP58511 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM11AP58511 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM11AP58511 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM11AP58511 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.27■□□□□ 0.84
SMIM11AP58511 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM11AP58511 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM11AP58511 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMIM11AP58511 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SMIM11AP58511 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.27■□□□□ 0.83
SMIM11AP58511 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SMIM11AP58511 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM11AP58511 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM11AP58511 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SMIM11AP58511 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM11AP58511 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM11AP58511 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM11AP58511 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM11AP58511 AC137630.3-201ENST00000607245 391 ntBASIC20.26■□□□□ 0.83
SMIM11AP58511 MIR6722-201ENST00000617286 78 ntBASIC20.26■□□□□ 0.83
SMIM11AP58511 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SMIM11AP58511 AC009086.3-201ENST00000623486 1008 ntBASIC20.26■□□□□ 0.83
SMIM11AP58511 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.26■□□□□ 0.83
SMIM11AP58511 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
SMIM11AP58511 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM11AP58511 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMIM11AP58511 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.25■□□□□ 0.83
SMIM11AP58511 YBX1P4-201ENST00000392794 808 ntBASIC20.25■□□□□ 0.83
SMIM11AP58511 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.25■□□□□ 0.83
SMIM11AP58511 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SMIM11AP58511 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.25■□□□□ 0.83
SMIM11AP58511 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMIM11AP58511 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SMIM11AP58511 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMIM11AP58511 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMIM11AP58511 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMIM11AP58511 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SMIM11AP58511 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMIM11AP58511 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMIM11AP58511 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SMIM11AP58511 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMIM11AP58511 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.24■□□□□ 0.83
SMIM11AP58511 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMIM11AP58511 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.24■□□□□ 0.83
SMIM11AP58511 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMIM11AP58511 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMIM11AP58511 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMIM11AP58511 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMIM11AP58511 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SMIM11AP58511 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMIM11AP58511 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMIM11AP58511 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.23■□□□□ 0.83
SMIM11AP58511 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms