Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
VSX2P58304 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VSX2P58304 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
VSX2P58304 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.11■□□□□ 0.97
VSX2P58304 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VSX2P58304 CA15P2-201ENST00000611168 834 ntBASIC21.11■□□□□ 0.97
VSX2P58304 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VSX2P58304 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VSX2P58304 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
VSX2P58304 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.11■□□□□ 0.97
VSX2P58304 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VSX2P58304 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VSX2P58304 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VSX2P58304 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
VSX2P58304 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.1■□□□□ 0.97
VSX2P58304 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
VSX2P58304 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
VSX2P58304 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.1■□□□□ 0.97
VSX2P58304 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VSX2P58304 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VSX2P58304 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
VSX2P58304 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.09■□□□□ 0.97
VSX2P58304 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.09■□□□□ 0.97
VSX2P58304 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
VSX2P58304 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.09■□□□□ 0.97
VSX2P58304 OR2I1P-207ENST00000453522 948 ntBASIC21.09■□□□□ 0.97
VSX2P58304 AC105265.2-201ENST00000467189 838 ntBASIC21.09■□□□□ 0.97
VSX2P58304 AC126544.1-201ENST00000580842 1059 ntBASIC21.09■□□□□ 0.97
VSX2P58304 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
VSX2P58304 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VSX2P58304 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.09■□□□□ 0.97
VSX2P58304 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VSX2P58304 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
VSX2P58304 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
VSX2P58304 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
VSX2P58304 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
VSX2P58304 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
VSX2P58304 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VSX2P58304 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
VSX2P58304 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
VSX2P58304 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
VSX2P58304 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.08■□□□□ 0.97
VSX2P58304 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.08■□□□□ 0.97
VSX2P58304 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.08■□□□□ 0.97
VSX2P58304 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
VSX2P58304 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.08■□□□□ 0.96
VSX2P58304 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
VSX2P58304 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.08■□□□□ 0.96
VSX2P58304 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
VSX2P58304 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
VSX2P58304 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
VSX2P58304 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.07■□□□□ 0.96
VSX2P58304 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VSX2P58304 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
VSX2P58304 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
VSX2P58304 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
VSX2P58304 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
VSX2P58304 DUSP8P3-201ENST00000399571 1760 ntBASIC21.06■□□□□ 0.96
VSX2P58304 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VSX2P58304 ZNRF2P3-201ENST00000424200 374 ntBASIC21.06■□□□□ 0.96
VSX2P58304 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.06■□□□□ 0.96
VSX2P58304 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
VSX2P58304 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.06■□□□□ 0.96
VSX2P58304 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.06■□□□□ 0.96
VSX2P58304 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.06■□□□□ 0.96
VSX2P58304 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
VSX2P58304 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
VSX2P58304 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.06■□□□□ 0.96
VSX2P58304 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
VSX2P58304 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
VSX2P58304 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VSX2P58304 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VSX2P58304 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
VSX2P58304 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.05■□□□□ 0.96
VSX2P58304 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VSX2P58304 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
VSX2P58304 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.05■□□□□ 0.96
VSX2P58304 AC133561.1-201ENST00000568600 2415 ntBASIC21.05■□□□□ 0.96
VSX2P58304 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VSX2P58304 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VSX2P58304 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
VSX2P58304 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VSX2P58304 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.05■□□□□ 0.96
VSX2P58304 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VSX2P58304 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.05■□□□□ 0.96
VSX2P58304 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VSX2P58304 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
VSX2P58304 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
VSX2P58304 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VSX2P58304 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VSX2P58304 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.04■□□□□ 0.96
VSX2P58304 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
VSX2P58304 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VSX2P58304 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VSX2P58304 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VSX2P58304 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VSX2P58304 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.04■□□□□ 0.96
VSX2P58304 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VSX2P58304 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VSX2P58304 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms