Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLNS1AP54105 ANOS2P-203ENST00000472227 1816 ntBASIC21.8■■□□□ 1.08
CLNS1AP54105 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLNS1AP54105 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLNS1AP54105 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.8■■□□□ 1.08
CLNS1AP54105 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLNS1AP54105 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.8■■□□□ 1.08
CLNS1AP54105 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLNS1AP54105 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLNS1AP54105 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CLNS1AP54105 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLNS1AP54105 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLNS1AP54105 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.8■■□□□ 1.08
CLNS1AP54105 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLNS1AP54105 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLNS1AP54105 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLNS1AP54105 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLNS1AP54105 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLNS1AP54105 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLNS1AP54105 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.79■■□□□ 1.08
CLNS1AP54105 U85056.1-201ENST00000616429 682 ntBASIC21.79■■□□□ 1.08
CLNS1AP54105 AC129492.7-201ENST00000622992 756 ntBASIC21.79■■□□□ 1.08
CLNS1AP54105 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLNS1AP54105 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLNS1AP54105 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CLNS1AP54105 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLNS1AP54105 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
CLNS1AP54105 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.78■■□□□ 1.08
CLNS1AP54105 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CLNS1AP54105 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.78■■□□□ 1.08
CLNS1AP54105 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.78■■□□□ 1.08
CLNS1AP54105 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CLNS1AP54105 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLNS1AP54105 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLNS1AP54105 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLNS1AP54105 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.78■■□□□ 1.08
CLNS1AP54105 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CLNS1AP54105 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CLNS1AP54105 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.78■■□□□ 1.08
CLNS1AP54105 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CLNS1AP54105 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLNS1AP54105 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLNS1AP54105 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CLNS1AP54105 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLNS1AP54105 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLNS1AP54105 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLNS1AP54105 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.77■■□□□ 1.08
CLNS1AP54105 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CLNS1AP54105 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLNS1AP54105 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLNS1AP54105 AC092068.2-201ENST00000590491 1708 ntBASIC21.77■■□□□ 1.08
CLNS1AP54105 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLNS1AP54105 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CLNS1AP54105 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CLNS1AP54105 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLNS1AP54105 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLNS1AP54105 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
CLNS1AP54105 AC007952.6-201ENST00000573168 2673 ntBASIC21.76■■□□□ 1.07
CLNS1AP54105 AC003957.1-201ENST00000625108 2673 ntBASIC21.76■■□□□ 1.07
CLNS1AP54105 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLNS1AP54105 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLNS1AP54105 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.76■■□□□ 1.07
CLNS1AP54105 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CLNS1AP54105 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLNS1AP54105 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLNS1AP54105 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
CLNS1AP54105 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLNS1AP54105 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLNS1AP54105 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLNS1AP54105 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLNS1AP54105 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLNS1AP54105 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLNS1AP54105 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.75■■□□□ 1.07
CLNS1AP54105 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.75■■□□□ 1.07
CLNS1AP54105 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.75■■□□□ 1.07
CLNS1AP54105 HSD17B1P1-201ENST00000590052 955 ntBASIC21.75■■□□□ 1.07
CLNS1AP54105 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLNS1AP54105 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLNS1AP54105 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLNS1AP54105 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.74■■□□□ 1.07
CLNS1AP54105 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLNS1AP54105 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.74■■□□□ 1.07
CLNS1AP54105 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLNS1AP54105 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CLNS1AP54105 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLNS1AP54105 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLNS1AP54105 AC022616.5-201ENST00000518796 181 ntBASIC21.74■■□□□ 1.07
CLNS1AP54105 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLNS1AP54105 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLNS1AP54105 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.73■■□□□ 1.07
CLNS1AP54105 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CLNS1AP54105 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLNS1AP54105 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
CLNS1AP54105 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLNS1AP54105 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLNS1AP54105 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CLNS1AP54105 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLNS1AP54105 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLNS1AP54105 AC019171.1-201ENST00000601251 1056 ntBASIC21.73■■□□□ 1.07
CLNS1AP54105 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms