Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 NUS1YDL193W 1128 nt3.56□□□□□ -1.84
UFD1P53044 TAF10YDR167W 621 nt3.56□□□□□ -1.84
UFD1P53044 YIL152WYIL152W 708 nt3.56□□□□□ -1.84
UFD1P53044 HEK2YBL032W 1146 nt3.56□□□□□ -1.84
UFD1P53044 YBL059WYBL059W 582 nt3.56□□□□□ -1.84
UFD1P53044 VPS69YPR087W 321 nt3.56□□□□□ -1.84
UFD1P53044 RER1YCL001W 567 nt3.56□□□□□ -1.84
UFD1P53044 YRM1YOR172W 2361 nt3.55□□□□□ -1.84
UFD1P53044 CDC6YJL194W 1542 nt3.55□□□□□ -1.84
UFD1P53044 DHR2YKL078W 2208 nt3.55□□□□□ -1.84
UFD1P53044 SAS4YDR181C 1446 nt3.55□□□□□ -1.84
UFD1P53044 SWI1YPL016W 3945 nt3.55□□□□□ -1.84
UFD1P53044 PTC1YDL006W 846 nt3.55□□□□□ -1.84
UFD1P53044 YER085CYER085C 522 nt3.55□□□□□ -1.84
UFD1P53044 YHR112CYHR112C 1137 nt3.55□□□□□ -1.84
UFD1P53044 MRT4YKL009W 711 nt3.55□□□□□ -1.84
UFD1P53044 RAD54YGL163C 2697 nt3.55□□□□□ -1.84
UFD1P53044 TAF6YGL112C 1551 nt3.55□□□□□ -1.84
UFD1P53044 KTR7YIL085C 1554 nt3.55□□□□□ -1.84
UFD1P53044 FRT2YAL028W 1587 nt3.55□□□□□ -1.84
UFD1P53044 SIR1YKR101W 1965 nt3.54□□□□□ -1.84
UFD1P53044 GLN4YOR168W 2430 nt3.54□□□□□ -1.84
UFD1P53044 FOX2YKR009C 2703 nt3.54□□□□□ -1.84
UFD1P53044 MET17YLR303W 1335 nt3.54□□□□□ -1.84
UFD1P53044 PSY4YBL046W 1326 nt3.54□□□□□ -1.84
UFD1P53044 NBP2YDR162C 711 nt3.54□□□□□ -1.84
UFD1P53044 SPI1YER150W 447 nt3.54□□□□□ -1.84
UFD1P53044 CAF16YFL028C 870 nt3.54□□□□□ -1.84
UFD1P53044 TIM21YGR033C 720 nt3.54□□□□□ -1.84
UFD1P53044 PXR1YGR280C 816 nt3.54□□□□□ -1.84
UFD1P53044 MRP4YHL004W 1185 nt3.54□□□□□ -1.84
UFD1P53044 GEP4YHR100C 558 nt3.54□□□□□ -1.84
UFD1P53044 YIL163CYIL163C 354 nt3.54□□□□□ -1.84
UFD1P53044 DAN1YJR150C 897 nt3.54□□□□□ -1.84
UFD1P53044 VTA1YLR181C 993 nt3.54□□□□□ -1.84
UFD1P53044 YBL010CYBL010C 843 nt3.54□□□□□ -1.84
UFD1P53044 SRP72YPL210C 1923 nt3.54□□□□□ -1.84
UFD1P53044 MDL1YLR188W 2088 nt3.53□□□□□ -1.84
UFD1P53044 ZRC1YMR243C 1329 nt3.53□□□□□ -1.84
UFD1P53044 TRM11YOL124C 1302 nt3.53□□□□□ -1.84
UFD1P53044 YKR047WYKR047W 306 nt3.53□□□□□ -1.84
UFD1P53044 YET2YMR040W 483 nt3.53□□□□□ -1.84
UFD1P53044 YNL181WYNL181W 1224 nt3.53□□□□□ -1.84
UFD1P53044 RAD17YOR368W 1206 nt3.53□□□□□ -1.84
UFD1P53044 CHD1YER164W 4407 nt3.53□□□□□ -1.84
UFD1P53044 SPC105YGL093W 2754 nt3.53□□□□□ -1.84
UFD1P53044 GDH2YDL215C 3279 nt3.53□□□□□ -1.84
UFD1P53044 XRS2YDR369C 2565 nt3.53□□□□□ -1.85
UFD1P53044 HPR1YDR138W 2259 nt3.53□□□□□ -1.85
UFD1P53044 PMT4YJR143C 2289 nt3.53□□□□□ -1.85
UFD1P53044 MCM7YBR202W 2538 nt3.52□□□□□ -1.85
UFD1P53044 RPN6YDL097C 1305 nt3.52□□□□□ -1.85
UFD1P53044 BIK1YCL029C 1323 nt3.52□□□□□ -1.85
UFD1P53044 AZR1YGR224W 1842 nt3.52□□□□□ -1.85
UFD1P53044 snR57snR57 88 nt3.52□□□□□ -1.85
UFD1P53044 PCL9YDL179W 915 nt3.52□□□□□ -1.85
UFD1P53044 FMP10YER182W 735 nt3.52□□□□□ -1.85
UFD1P53044 YIL047C-AYIL047C-A 369 nt3.52□□□□□ -1.85
UFD1P53044 TAF4YMR005W 1167 nt3.52□□□□□ -1.85
UFD1P53044 TPP1YMR156C 717 nt3.52□□□□□ -1.85
UFD1P53044 GDT1YBR187W 843 nt3.52□□□□□ -1.85
UFD1P53044 FRM2YCL026C-A 582 nt3.52□□□□□ -1.85
UFD1P53044 TYW1YPL207W 2433 nt3.52□□□□□ -1.85
UFD1P53044 STB3YDR169C 1542 nt3.51□□□□□ -1.85
UFD1P53044 CHL1YPL008W 2586 nt3.51□□□□□ -1.85
UFD1P53044 ELO2YCR034W 1044 nt3.51□□□□□ -1.85
UFD1P53044 COS7YDL248W 1152 nt3.51□□□□□ -1.85
UFD1P53044 DOS2YDR068W 933 nt3.51□□□□□ -1.85
UFD1P53044 ENT5YDR153C 1236 nt3.51□□□□□ -1.85
UFD1P53044 tL(UAG)JtL(UAG)J 82 nt3.51□□□□□ -1.85
UFD1P53044 tL(UAG)L1tL(UAG)L1 82 nt3.51□□□□□ -1.85
UFD1P53044 tL(UAG)L2tL(UAG)L2 82 nt3.51□□□□□ -1.85
UFD1P53044 YHR137C-AYHR137C-A 651 nt3.51□□□□□ -1.85
UFD1P53044 COS5YJR161C 1152 nt3.51□□□□□ -1.85
UFD1P53044 IDP2YLR174W 1239 nt3.51□□□□□ -1.85
UFD1P53044 UTP23YOR004W 765 nt3.51□□□□□ -1.85
UFD1P53044 MIF2YKL089W 1650 nt3.51□□□□□ -1.85
UFD1P53044 MUP3YHL036W 1641 nt3.51□□□□□ -1.85
UFD1P53044 RSC58YLR033W 1509 nt3.5□□□□□ -1.85
UFD1P53044 CNA1YLR433C 1662 nt3.5□□□□□ -1.85
UFD1P53044 DAS2YDR020C 699 nt3.5□□□□□ -1.85
UFD1P53044 SPC19YDR201W 498 nt3.5□□□□□ -1.85
UFD1P53044 YDR249CYDR249C 1122 nt3.5□□□□□ -1.85
UFD1P53044 API2YDR525W 330 nt3.5□□□□□ -1.85
UFD1P53044 RPS4BYHR203C 786 nt3.5□□□□□ -1.85
UFD1P53044 RPS4AYJR145C 786 nt3.5□□□□□ -1.85
UFD1P53044 MYO3YKL129C 3819 nt3.5□□□□□ -1.85
UFD1P53044 YIM2YMR151W 438 nt3.5□□□□□ -1.85
UFD1P53044 YOL050CYOL050C 321 nt3.5□□□□□ -1.85
UFD1P53044 RPS19AYOL121C 435 nt3.5□□□□□ -1.85
UFD1P53044 YOR034C-AYOR034C-A 243 nt3.5□□□□□ -1.85
UFD1P53044 YPR059CYPR059C 387 nt3.5□□□□□ -1.85
UFD1P53044 SCD6YPR129W 1050 nt3.5□□□□□ -1.85
UFD1P53044 PHO12YHR215W 1404 nt3.5□□□□□ -1.85
UFD1P53044 PHO11YAR071W 1404 nt3.5□□□□□ -1.85
UFD1P53044 RPB2YOR151C 3675 nt3.5□□□□□ -1.85
UFD1P53044 RNA14YMR061W 2034 nt3.49□□□□□ -1.85
UFD1P53044 LSM6YDR378C 261 nt3.49□□□□□ -1.85
UFD1P53044 HIS6YIL020C 786 nt3.49□□□□□ -1.85
UFD1P53044 YMR114CYMR114C 1107 nt3.49□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 20.3 ms