Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.65■■□□□ 1.06
CLCNKAP51800 AP005435.1-201ENST00000529293 1178 ntBASIC21.65■■□□□ 1.06
CLCNKAP51800 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.65■■□□□ 1.06
CLCNKAP51800 AC126544.1-201ENST00000580842 1059 ntBASIC21.65■■□□□ 1.06
CLCNKAP51800 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.65■■□□□ 1.06
CLCNKAP51800 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CLCNKAP51800 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.64■■□□□ 1.06
CLCNKAP51800 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
CLCNKAP51800 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.64■■□□□ 1.06
CLCNKAP51800 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.64■■□□□ 1.06
CLCNKAP51800 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.64■■□□□ 1.06
CLCNKAP51800 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLCNKAP51800 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.64■■□□□ 1.06
CLCNKAP51800 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CLCNKAP51800 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLCNKAP51800 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CLCNKAP51800 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
CLCNKAP51800 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.64■■□□□ 1.05
CLCNKAP51800 AC010525.1-201ENST00000585559 441 ntBASIC21.64■■□□□ 1.05
CLCNKAP51800 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLCNKAP51800 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.05
CLCNKAP51800 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLCNKAP51800 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CLCNKAP51800 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCNKAP51800 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCNKAP51800 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCNKAP51800 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.63■■□□□ 1.05
CLCNKAP51800 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CLCNKAP51800 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.63■■□□□ 1.05
CLCNKAP51800 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLCNKAP51800 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCNKAP51800 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCNKAP51800 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
CLCNKAP51800 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCNKAP51800 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.62■■□□□ 1.05
CLCNKAP51800 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCNKAP51800 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCNKAP51800 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCNKAP51800 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.62■■□□□ 1.05
CLCNKAP51800 IRS3P-201ENST00000223076 1006 ntBASIC21.62■■□□□ 1.05
CLCNKAP51800 MIR935-201ENST00000401179 91 ntBASIC21.62■■□□□ 1.05
CLCNKAP51800 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.62■■□□□ 1.05
CLCNKAP51800 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCNKAP51800 IGHV3-19-201ENST00000521488 291 ntBASIC21.62■■□□□ 1.05
CLCNKAP51800 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.62■■□□□ 1.05
CLCNKAP51800 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.62■■□□□ 1.05
CLCNKAP51800 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLCNKAP51800 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.62■■□□□ 1.05
CLCNKAP51800 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CLCNKAP51800 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLCNKAP51800 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CLCNKAP51800 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLCNKAP51800 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.61■■□□□ 1.05
CLCNKAP51800 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLCNKAP51800 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.61■■□□□ 1.05
CLCNKAP51800 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.61■■□□□ 1.05
CLCNKAP51800 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.61■■□□□ 1.05
CLCNKAP51800 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLCNKAP51800 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLCNKAP51800 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLCNKAP51800 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CLCNKAP51800 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CLCNKAP51800 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLCNKAP51800 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.6■■□□□ 1.05
CLCNKAP51800 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.6■■□□□ 1.05
CLCNKAP51800 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.6■■□□□ 1.05
CLCNKAP51800 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLCNKAP51800 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLCNKAP51800 AC068587.7-201ENST00000641602 218 ntBASIC21.6■■□□□ 1.05
CLCNKAP51800 DUSP8P3-201ENST00000399571 1760 ntBASIC21.6■■□□□ 1.05
CLCNKAP51800 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLCNKAP51800 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CLCNKAP51800 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.59■■□□□ 1.05
CLCNKAP51800 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCNKAP51800 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
CLCNKAP51800 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.59■■□□□ 1.05
CLCNKAP51800 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.59■■□□□ 1.05
CLCNKAP51800 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLCNKAP51800 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCNKAP51800 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CLCNKAP51800 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.59■■□□□ 1.05
CLCNKAP51800 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.59■■□□□ 1.05
CLCNKAP51800 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.59■■□□□ 1.05
CLCNKAP51800 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CLCNKAP51800 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCNKAP51800 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLCNKAP51800 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLCNKAP51800 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLCNKAP51800 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CLCNKAP51800 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CLCNKAP51800 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLCNKAP51800 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.58■■□□□ 1.05
CLCNKAP51800 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CLCNKAP51800 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.58■■□□□ 1.05
CLCNKAP51800 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLCNKAP51800 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CLCNKAP51800 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CLCNKAP51800 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CLCNKAP51800 TSPY26P-201ENST00000476365 1326 ntBASIC21.57■■□□□ 1.04
CLCNKAP51800 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms