Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
MECP2P51608 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MECP2P51608 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MECP2P51608 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
MECP2P51608 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
MECP2P51608 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.77■□□□□ 0.6
MECP2P51608 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
MECP2P51608 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.77■□□□□ 0.6
MECP2P51608 AC007029.1-201ENST00000604183 313 ntBASIC18.77■□□□□ 0.6
MECP2P51608 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MECP2P51608 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.77■□□□□ 0.6
MECP2P51608 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MECP2P51608 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MECP2P51608 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.76■□□□□ 0.59
MECP2P51608 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MECP2P51608 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MECP2P51608 FAM99A-202ENST00000538190 1989 ntBASIC18.76■□□□□ 0.59
MECP2P51608 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.76■□□□□ 0.59
MECP2P51608 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
MECP2P51608 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MECP2P51608 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MECP2P51608 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MECP2P51608 AC092667.1-201ENST00000434301 2586 ntBASIC18.76■□□□□ 0.59
MECP2P51608 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MECP2P51608 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
MECP2P51608 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MECP2P51608 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
MECP2P51608 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MECP2P51608 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.75■□□□□ 0.59
MECP2P51608 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MECP2P51608 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MECP2P51608 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MECP2P51608 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
MECP2P51608 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MECP2P51608 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.75■□□□□ 0.59
MECP2P51608 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
MECP2P51608 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.75■□□□□ 0.59
MECP2P51608 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MECP2P51608 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MECP2P51608 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MECP2P51608 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
MECP2P51608 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MECP2P51608 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MECP2P51608 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MECP2P51608 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
MECP2P51608 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
MECP2P51608 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
MECP2P51608 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MECP2P51608 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MECP2P51608 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MECP2P51608 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MECP2P51608 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.73■□□□□ 0.59
MECP2P51608 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MECP2P51608 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.73■□□□□ 0.59
MECP2P51608 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MECP2P51608 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MECP2P51608 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MECP2P51608 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
MECP2P51608 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.73■□□□□ 0.59
MECP2P51608 AC090877.2-201ENST00000558441 1738 ntBASIC18.73■□□□□ 0.59
MECP2P51608 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
MECP2P51608 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MECP2P51608 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.73■□□□□ 0.59
MECP2P51608 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
MECP2P51608 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MECP2P51608 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MECP2P51608 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MECP2P51608 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MECP2P51608 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.73■□□□□ 0.59
MECP2P51608 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MECP2P51608 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MECP2P51608 AC010542.4-201ENST00000563151 1910 ntBASIC18.72■□□□□ 0.59
MECP2P51608 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MECP2P51608 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.72■□□□□ 0.59
MECP2P51608 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MECP2P51608 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MECP2P51608 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MECP2P51608 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.72■□□□□ 0.59
MECP2P51608 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.72■□□□□ 0.59
MECP2P51608 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MECP2P51608 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MECP2P51608 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MECP2P51608 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.72■□□□□ 0.59
MECP2P51608 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
MECP2P51608 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
MECP2P51608 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MECP2P51608 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MECP2P51608 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MECP2P51608 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
MECP2P51608 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
MECP2P51608 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MECP2P51608 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
MECP2P51608 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MECP2P51608 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MECP2P51608 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.71■□□□□ 0.59
MECP2P51608 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
MECP2P51608 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MECP2P51608 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MECP2P51608 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MECP2P51608 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms