Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF144AP50876 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RNF144AP50876 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
RNF144AP50876 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF144AP50876 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF144AP50876 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
RNF144AP50876 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF144AP50876 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.42■□□□□ 0.86
RNF144AP50876 AC004687.1-201ENST00000579003 1625 ntBASIC20.42■□□□□ 0.86
RNF144AP50876 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF144AP50876 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RNF144AP50876 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.42■□□□□ 0.86
RNF144AP50876 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.42■□□□□ 0.86
RNF144AP50876 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF144AP50876 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF144AP50876 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
RNF144AP50876 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.42■□□□□ 0.86
RNF144AP50876 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.42■□□□□ 0.86
RNF144AP50876 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF144AP50876 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF144AP50876 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.42■□□□□ 0.86
RNF144AP50876 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RNF144AP50876 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RNF144AP50876 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF144AP50876 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF144AP50876 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF144AP50876 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF144AP50876 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RNF144AP50876 EP400NL-214ENST00000641289 2402 ntBASIC20.41■□□□□ 0.86
RNF144AP50876 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF144AP50876 AL512631.2-201ENST00000604634 923 ntBASIC20.41■□□□□ 0.86
RNF144AP50876 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.41■□□□□ 0.86
RNF144AP50876 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF144AP50876 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF144AP50876 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF144AP50876 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RNF144AP50876 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF144AP50876 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF144AP50876 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RNF144AP50876 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RNF144AP50876 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF144AP50876 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF144AP50876 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
RNF144AP50876 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RNF144AP50876 AC099791.2-201ENST00000605725 427 ntBASIC20.4■□□□□ 0.86
RNF144AP50876 MIR4466-201ENST00000606121 54 ntBASIC20.4■□□□□ 0.86
RNF144AP50876 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.4■□□□□ 0.86
RNF144AP50876 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.4■□□□□ 0.86
RNF144AP50876 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RNF144AP50876 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF144AP50876 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF144AP50876 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RNF144AP50876 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF144AP50876 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.39■□□□□ 0.86
RNF144AP50876 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.39■□□□□ 0.85
RNF144AP50876 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF144AP50876 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.39■□□□□ 0.85
RNF144AP50876 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.39■□□□□ 0.85
RNF144AP50876 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF144AP50876 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF144AP50876 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RNF144AP50876 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF144AP50876 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF144AP50876 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF144AP50876 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RNF144AP50876 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF144AP50876 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF144AP50876 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF144AP50876 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF144AP50876 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF144AP50876 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF144AP50876 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF144AP50876 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.38■□□□□ 0.85
RNF144AP50876 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF144AP50876 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF144AP50876 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.37■□□□□ 0.85
RNF144AP50876 AC131281.2-201ENST00000520478 145 ntBASIC20.37■□□□□ 0.85
RNF144AP50876 DUX4L4-201ENST00000566884 1269 ntBASIC20.37■□□□□ 0.85
RNF144AP50876 AC009086.3-201ENST00000623486 1008 ntBASIC20.37■□□□□ 0.85
RNF144AP50876 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.37■□□□□ 0.85
RNF144AP50876 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF144AP50876 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF144AP50876 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RNF144AP50876 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RNF144AP50876 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF144AP50876 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF144AP50876 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF144AP50876 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF144AP50876 FP325331.1-202ENST00000623531 1380 ntBASIC20.36■□□□□ 0.85
RNF144AP50876 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF144AP50876 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF144AP50876 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF144AP50876 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF144AP50876 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF144AP50876 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF144AP50876 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF144AP50876 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF144AP50876 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF144AP50876 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.36■□□□□ 0.85
RNF144AP50876 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms