Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRIM2P49643 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PRIM2P49643 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.89■□□□□ 0.93
PRIM2P49643 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRIM2P49643 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
PRIM2P49643 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PRIM2P49643 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRIM2P49643 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.89■□□□□ 0.93
PRIM2P49643 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.88■□□□□ 0.93
PRIM2P49643 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRIM2P49643 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.88■□□□□ 0.93
PRIM2P49643 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PRIM2P49643 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRIM2P49643 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.88■□□□□ 0.93
PRIM2P49643 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRIM2P49643 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.88■□□□□ 0.93
PRIM2P49643 AC144652.1-201ENST00000609974 1624 ntBASIC20.88■□□□□ 0.93
PRIM2P49643 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRIM2P49643 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRIM2P49643 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRIM2P49643 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRIM2P49643 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.87■□□□□ 0.93
PRIM2P49643 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.87■□□□□ 0.93
PRIM2P49643 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.87■□□□□ 0.93
PRIM2P49643 LINC00565-201ENST00000562710 2331 ntBASIC20.87■□□□□ 0.93
PRIM2P49643 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRIM2P49643 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PRIM2P49643 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRIM2P49643 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRIM2P49643 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRIM2P49643 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.87■□□□□ 0.93
PRIM2P49643 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PRIM2P49643 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.87■□□□□ 0.93
PRIM2P49643 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRIM2P49643 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRIM2P49643 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRIM2P49643 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.86■□□□□ 0.93
PRIM2P49643 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.86■□□□□ 0.93
PRIM2P49643 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.86■□□□□ 0.93
PRIM2P49643 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRIM2P49643 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRIM2P49643 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRIM2P49643 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.86■□□□□ 0.93
PRIM2P49643 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.86■□□□□ 0.93
PRIM2P49643 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PRIM2P49643 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.86■□□□□ 0.93
PRIM2P49643 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PRIM2P49643 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.86■□□□□ 0.93
PRIM2P49643 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRIM2P49643 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRIM2P49643 AC242852.2-201ENST00000615738 1807 ntBASIC20.85■□□□□ 0.93
PRIM2P49643 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRIM2P49643 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PRIM2P49643 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.85■□□□□ 0.93
PRIM2P49643 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRIM2P49643 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRIM2P49643 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PRIM2P49643 UNC93B8-201ENST00000511903 705 ntBASIC20.85■□□□□ 0.93
PRIM2P49643 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRIM2P49643 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRIM2P49643 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRIM2P49643 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PRIM2P49643 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRIM2P49643 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRIM2P49643 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRIM2P49643 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.85■□□□□ 0.93
PRIM2P49643 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRIM2P49643 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRIM2P49643 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.84■□□□□ 0.93
PRIM2P49643 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRIM2P49643 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.84■□□□□ 0.93
PRIM2P49643 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRIM2P49643 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRIM2P49643 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PRIM2P49643 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.84■□□□□ 0.93
PRIM2P49643 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
PRIM2P49643 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.84■□□□□ 0.93
PRIM2P49643 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.84■□□□□ 0.93
PRIM2P49643 MIR6724-1-201ENST00000616420 92 ntBASIC20.84■□□□□ 0.93
PRIM2P49643 MIR6724-2-201ENST00000616483 92 ntBASIC20.84■□□□□ 0.93
PRIM2P49643 MIR6724-4-201ENST00000617390 92 ntBASIC20.84■□□□□ 0.93
PRIM2P49643 MIR6724-3-201ENST00000622482 92 ntBASIC20.84■□□□□ 0.93
PRIM2P49643 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PRIM2P49643 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PRIM2P49643 AC127496.7-201ENST00000625110 1798 ntBASIC20.84■□□□□ 0.93
PRIM2P49643 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRIM2P49643 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.84■□□□□ 0.93
PRIM2P49643 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRIM2P49643 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PRIM2P49643 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.83■□□□□ 0.93
PRIM2P49643 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRIM2P49643 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRIM2P49643 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRIM2P49643 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PRIM2P49643 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PRIM2P49643 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.83■□□□□ 0.93
PRIM2P49643 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRIM2P49643 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRIM2P49643 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRIM2P49643 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms