Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GABRA4P48169 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.01■□□□□ 0.95
GABRA4P48169 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
GABRA4P48169 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GABRA4P48169 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.01■□□□□ 0.95
GABRA4P48169 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.01■□□□□ 0.95
GABRA4P48169 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
GABRA4P48169 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.01■□□□□ 0.95
GABRA4P48169 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
GABRA4P48169 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
GABRA4P48169 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21■□□□□ 0.95
GABRA4P48169 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GABRA4P48169 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
GABRA4P48169 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
GABRA4P48169 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21■□□□□ 0.95
GABRA4P48169 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GABRA4P48169 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21■□□□□ 0.95
GABRA4P48169 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GABRA4P48169 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21■□□□□ 0.95
GABRA4P48169 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21■□□□□ 0.95
GABRA4P48169 DUSP8P3-201ENST00000399571 1760 ntBASIC21■□□□□ 0.95
GABRA4P48169 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GABRA4P48169 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GABRA4P48169 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
GABRA4P48169 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.99■□□□□ 0.95
GABRA4P48169 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.99■□□□□ 0.95
GABRA4P48169 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.99■□□□□ 0.95
GABRA4P48169 MIR6821-201ENST00000617625 74 ntBASIC20.99■□□□□ 0.95
GABRA4P48169 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.99■□□□□ 0.95
GABRA4P48169 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GABRA4P48169 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GABRA4P48169 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GABRA4P48169 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.99■□□□□ 0.95
GABRA4P48169 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
GABRA4P48169 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GABRA4P48169 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
GABRA4P48169 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GABRA4P48169 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GABRA4P48169 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GABRA4P48169 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GABRA4P48169 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
GABRA4P48169 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.98■□□□□ 0.95
GABRA4P48169 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GABRA4P48169 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GABRA4P48169 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.98■□□□□ 0.95
GABRA4P48169 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
GABRA4P48169 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GABRA4P48169 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
GABRA4P48169 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.98■□□□□ 0.95
GABRA4P48169 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.98■□□□□ 0.95
GABRA4P48169 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GABRA4P48169 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GABRA4P48169 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.98■□□□□ 0.95
GABRA4P48169 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GABRA4P48169 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GABRA4P48169 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GABRA4P48169 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.97■□□□□ 0.95
GABRA4P48169 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
GABRA4P48169 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GABRA4P48169 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.97■□□□□ 0.95
GABRA4P48169 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GABRA4P48169 AC097381.1-201ENST00000429019 1296 ntBASIC20.97■□□□□ 0.95
GABRA4P48169 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.97■□□□□ 0.95
GABRA4P48169 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
GABRA4P48169 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.97■□□□□ 0.95
GABRA4P48169 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GABRA4P48169 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.97■□□□□ 0.95
GABRA4P48169 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
GABRA4P48169 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GABRA4P48169 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.96■□□□□ 0.95
GABRA4P48169 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GABRA4P48169 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.96■□□□□ 0.95
GABRA4P48169 AC068587.7-201ENST00000641602 218 ntBASIC20.96■□□□□ 0.95
GABRA4P48169 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GABRA4P48169 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GABRA4P48169 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
GABRA4P48169 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GABRA4P48169 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.95■□□□□ 0.95
GABRA4P48169 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.95■□□□□ 0.95
GABRA4P48169 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GABRA4P48169 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GABRA4P48169 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.95■□□□□ 0.94
GABRA4P48169 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GABRA4P48169 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GABRA4P48169 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GABRA4P48169 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GABRA4P48169 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GABRA4P48169 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GABRA4P48169 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GABRA4P48169 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.95■□□□□ 0.94
GABRA4P48169 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GABRA4P48169 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GABRA4P48169 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.95■□□□□ 0.94
GABRA4P48169 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GABRA4P48169 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
GABRA4P48169 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
GABRA4P48169 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.94■□□□□ 0.94
GABRA4P48169 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
GABRA4P48169 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.94■□□□□ 0.94
GABRA4P48169 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms