Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 ZPR1YGR211W 1461 nt3.67□□□□□ -1.82
CDC40P40968 YGL036WYGL036W 2730 nt3.66□□□□□ -1.82
CDC40P40968 NHX1YDR456W 1902 nt3.66□□□□□ -1.82
CDC40P40968 PMS1YNL082W 2622 nt3.66□□□□□ -1.82
CDC40P40968 THI21YPL258C 1656 nt3.66□□□□□ -1.82
CDC40P40968 YCR023CYCR023C 1836 nt3.66□□□□□ -1.82
CDC40P40968 RPS11AYDR025W 471 nt3.66□□□□□ -1.82
CDC40P40968 PRO3YER023W 861 nt3.66□□□□□ -1.82
CDC40P40968 BIO2YGR286C 1128 nt3.66□□□□□ -1.82
CDC40P40968 YHI9YHR029C 885 nt3.66□□□□□ -1.82
CDC40P40968 YIL089WYIL089W 618 nt3.66□□□□□ -1.82
CDC40P40968 SFH5YJL145W 885 nt3.66□□□□□ -1.82
CDC40P40968 YAR023CYAR023C 540 nt3.66□□□□□ -1.82
CDC40P40968 YBR056W-AYBR056W-A 201 nt3.66□□□□□ -1.82
CDC40P40968 TDA3YHR009C 1572 nt3.66□□□□□ -1.82
CDC40P40968 POL31YJR006W 1464 nt3.66□□□□□ -1.82
CDC40P40968 YCF1YDR135C 4548 nt3.65□□□□□ -1.82
CDC40P40968 RRB1YMR131C 1536 nt3.65□□□□□ -1.82
CDC40P40968 PER1YCR044C 1074 nt3.65□□□□□ -1.83
CDC40P40968 RPS13YDR064W 456 nt3.65□□□□□ -1.83
CDC40P40968 YGL194C-AYGL194C-A 243 nt3.65□□□□□ -1.83
CDC40P40968 HIS6YIL020C 786 nt3.65□□□□□ -1.83
CDC40P40968 PSF3YOL146W 585 nt3.65□□□□□ -1.83
CDC40P40968 RPO21YDL140C 5202 nt3.64□□□□□ -1.83
CDC40P40968 RIA1YNL163C 3333 nt3.64□□□□□ -1.83
CDC40P40968 APC4YDR118W 1959 nt3.64□□□□□ -1.83
CDC40P40968 FMP10YER182W 735 nt3.64□□□□□ -1.83
CDC40P40968 COS8YHL048W 1146 nt3.64□□□□□ -1.83
CDC40P40968 YLR049CYLR049C 1287 nt3.64□□□□□ -1.83
CDC40P40968 YLR225CYLR225C 1224 nt3.64□□□□□ -1.83
CDC40P40968 ARG80YMR042W 534 nt3.64□□□□□ -1.83
CDC40P40968 PRS5YOL061W 1491 nt3.64□□□□□ -1.83
CDC40P40968 UBP12YJL197W 3765 nt3.64□□□□□ -1.83
CDC40P40968 APL4YPR029C 2499 nt3.64□□□□□ -1.83
CDC40P40968 SEC6YIL068C 2418 nt3.63□□□□□ -1.83
CDC40P40968 SPO16YHR153C 597 nt3.63□□□□□ -1.83
CDC40P40968 YAL047W-AYAL047W-A 330 nt3.63□□□□□ -1.83
CDC40P40968 CDC73YLR418C 1182 nt3.63□□□□□ -1.83
CDC40P40968 YNL174WYNL174W 573 nt3.63□□□□□ -1.83
CDC40P40968 YOR314WYOR314W 330 nt3.63□□□□□ -1.83
CDC40P40968 VPS28YPL065W 729 nt3.63□□□□□ -1.83
CDC40P40968 GAL11YOL051W 3246 nt3.63□□□□□ -1.83
CDC40P40968 MIS1YBR084W 2928 nt3.63□□□□□ -1.83
CDC40P40968 YPR003CYPR003C 2265 nt3.63□□□□□ -1.83
CDC40P40968 FLC1YPL221W 2382 nt3.62□□□□□ -1.83
CDC40P40968 PEP7YDR323C 1548 nt3.62□□□□□ -1.83
CDC40P40968 NSG1YHR133C 876 nt3.62□□□□□ -1.83
CDC40P40968 GON7YJL184W 372 nt3.62□□□□□ -1.83
CDC40P40968 TRM10YOL093W 882 nt3.62□□□□□ -1.83
CDC40P40968 IDH2YOR136W 1110 nt3.62□□□□□ -1.83
CDC40P40968 YOR186WYOR186W 435 nt3.62□□□□□ -1.83
CDC40P40968 BMT2YBR141C 1014 nt3.62□□□□□ -1.83
CDC40P40968 CAF130YGR134W 3369 nt3.62□□□□□ -1.83
CDC40P40968 NOC2YOR206W 2133 nt3.62□□□□□ -1.83
CDC40P40968 VPS73YGL104C 1461 nt3.61□□□□□ -1.83
CDC40P40968 YBR238CYBR238C 2196 nt3.61□□□□□ -1.83
CDC40P40968 SRO7YPR032W 3102 nt3.61□□□□□ -1.83
CDC40P40968 snR7-LsnR7-L 214 nt3.61□□□□□ -1.83
CDC40P40968 YGR035W-AYGR035W-A 222 nt3.61□□□□□ -1.83
CDC40P40968 ARC15YIL062C 465 nt3.61□□□□□ -1.83
CDC40P40968 GAT4YIR013C 366 nt3.61□□□□□ -1.83
CDC40P40968 RUF21RUF21 707 nt3.61□□□□□ -1.83
CDC40P40968 YBL059WYBL059W 582 nt3.61□□□□□ -1.83
CDC40P40968 YBL081WYBL081W 1107 nt3.61□□□□□ -1.83
CDC40P40968 RPL18BYNL301C 561 nt3.61□□□□□ -1.83
CDC40P40968 RPL18AYOL120C 561 nt3.61□□□□□ -1.83
CDC40P40968 MED7YOL135C 669 nt3.61□□□□□ -1.83
CDC40P40968 YPL199CYPL199C 723 nt3.61□□□□□ -1.83
CDC40P40968 HSP26YBR072W 645 nt3.61□□□□□ -1.83
CDC40P40968 TRF5YNL299W 1929 nt3.61□□□□□ -1.83
CDC40P40968 KRE29YER038C 1395 nt3.61□□□□□ -1.83
CDC40P40968 FAS2YPL231W 5664 nt3.61□□□□□ -1.83
CDC40P40968 RPG1YBR079C 2895 nt3.61□□□□□ -1.83
CDC40P40968 TRK1YJL129C 3708 nt3.6□□□□□ -1.83
CDC40P40968 YJR015WYJR015W 1533 nt3.6□□□□□ -1.83
CDC40P40968 ECM22YLR228C 2445 nt3.6□□□□□ -1.83
CDC40P40968 PRP11YDL043C 801 nt3.6□□□□□ -1.83
CDC40P40968 snR7-SsnR7-S 179 nt3.6□□□□□ -1.83
CDC40P40968 RCR2YDR003W 633 nt3.6□□□□□ -1.83
CDC40P40968 YDR056CYDR056C 618 nt3.6□□□□□ -1.83
CDC40P40968 PNP1YLR209C 936 nt3.6□□□□□ -1.83
CDC40P40968 RAD17YOR368W 1206 nt3.6□□□□□ -1.83
CDC40P40968 BBP1YPL255W 1158 nt3.6□□□□□ -1.83
CDC40P40968 HMS1YOR032C 1305 nt3.6□□□□□ -1.83
CDC40P40968 VMA1YDL185W 3216 nt3.6□□□□□ -1.83
CDC40P40968 PGS1YCL004W 1566 nt3.59□□□□□ -1.83
CDC40P40968 SPT23YKL020C 3249 nt3.59□□□□□ -1.83
CDC40P40968 RTS1YOR014W 2274 nt3.59□□□□□ -1.83
CDC40P40968 TOS8YGL096W 831 nt3.59□□□□□ -1.83
CDC40P40968 YBL006W-AYBL006W-A 150 nt3.59□□□□□ -1.83
CDC40P40968 YPL025CYPL025C 558 nt3.59□□□□□ -1.83
CDC40P40968 CLB5YPR120C 1308 nt3.59□□□□□ -1.83
CDC40P40968 MTC1YJL123C 1437 nt3.59□□□□□ -1.84
CDC40P40968 NRP1YDL167C 2160 nt3.59□□□□□ -1.84
CDC40P40968 KGD1YIL125W 3045 nt3.59□□□□□ -1.84
CDC40P40968 CDC14YFR028C 1656 nt3.59□□□□□ -1.84
CDC40P40968 BRE4YDL231C 3378 nt3.58□□□□□ -1.84
CDC40P40968 DSL1YNL258C 2265 nt3.58□□□□□ -1.84
CDC40P40968 YDR134CYDR134C 411 nt3.58□□□□□ -1.84
CDC40P40968 NUP42YDR192C 1293 nt3.58□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms