Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.04■■□□□ 1.12
HMGCLP35914 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HMGCLP35914 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGCLP35914 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGCLP35914 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HMGCLP35914 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
HMGCLP35914 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
HMGCLP35914 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
HMGCLP35914 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
HMGCLP35914 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGCLP35914 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HMGCLP35914 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
HMGCLP35914 C1orf229-201ENST00000623686 2258 ntBASIC22.03■■□□□ 1.12
HMGCLP35914 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGCLP35914 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
HMGCLP35914 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
HMGCLP35914 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.02■■□□□ 1.12
HMGCLP35914 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HMGCLP35914 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HMGCLP35914 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.02■■□□□ 1.12
HMGCLP35914 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.02■■□□□ 1.12
HMGCLP35914 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.02■■□□□ 1.12
HMGCLP35914 AL139246.5-201ENST00000606645 996 ntBASIC22.02■■□□□ 1.12
HMGCLP35914 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
HMGCLP35914 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.02■■□□□ 1.12
HMGCLP35914 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HMGCLP35914 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
HMGCLP35914 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
HMGCLP35914 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HMGCLP35914 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HMGCLP35914 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.02■■□□□ 1.12
HMGCLP35914 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.02■■□□□ 1.11
HMGCLP35914 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.11
HMGCLP35914 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
HMGCLP35914 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.01■■□□□ 1.11
HMGCLP35914 PBX2P1-201ENST00000493219 1291 ntBASIC22.01■■□□□ 1.11
HMGCLP35914 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.01■■□□□ 1.11
HMGCLP35914 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.01■■□□□ 1.11
HMGCLP35914 MIR4767-201ENST00000582827 78 ntBASIC22.01■■□□□ 1.11
HMGCLP35914 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HMGCLP35914 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.01■■□□□ 1.11
HMGCLP35914 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
HMGCLP35914 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HMGCLP35914 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HMGCLP35914 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
HMGCLP35914 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.01■■□□□ 1.11
HMGCLP35914 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22■■□□□ 1.11
HMGCLP35914 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HMGCLP35914 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
HMGCLP35914 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
HMGCLP35914 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22■■□□□ 1.11
HMGCLP35914 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HMGCLP35914 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
HMGCLP35914 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
HMGCLP35914 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.99■■□□□ 1.11
HMGCLP35914 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.99■■□□□ 1.11
HMGCLP35914 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCLP35914 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCLP35914 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCLP35914 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
HMGCLP35914 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCLP35914 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
HMGCLP35914 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
HMGCLP35914 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCLP35914 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCLP35914 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.99■■□□□ 1.11
HMGCLP35914 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
HMGCLP35914 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
HMGCLP35914 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCLP35914 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCLP35914 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCLP35914 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCLP35914 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCLP35914 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.98■■□□□ 1.11
HMGCLP35914 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.98■■□□□ 1.11
HMGCLP35914 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.98■■□□□ 1.11
HMGCLP35914 AC133561.4-201ENST00000566112 224 ntBASIC21.98■■□□□ 1.11
HMGCLP35914 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.98■■□□□ 1.11
HMGCLP35914 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.98■■□□□ 1.11
HMGCLP35914 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCLP35914 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
HMGCLP35914 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
HMGCLP35914 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCLP35914 LINC01960-201ENST00000563759 1884 ntBASIC21.97■■□□□ 1.11
HMGCLP35914 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.97■■□□□ 1.11
HMGCLP35914 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
HMGCLP35914 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HMGCLP35914 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HMGCLP35914 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HMGCLP35914 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HMGCLP35914 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HMGCLP35914 AC012676.1-201ENST00000574705 1949 ntBASIC21.96■■□□□ 1.11
HMGCLP35914 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HMGCLP35914 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HMGCLP35914 EDA-201ENST00000338901 1233 ntBASIC21.96■■□□□ 1.11
HMGCLP35914 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HMGCLP35914 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.96■■□□□ 1.11
HMGCLP35914 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HMGCLP35914 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.96■■□□□ 1.11
HMGCLP35914 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms