Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.51■□□□□ 0.87
GABRA3P34903 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
GABRA3P34903 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.51■□□□□ 0.87
GABRA3P34903 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.51■□□□□ 0.87
GABRA3P34903 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GABRA3P34903 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.5■□□□□ 0.87
GABRA3P34903 AC233723.2-201ENST00000623798 2106 ntBASIC20.5■□□□□ 0.87
GABRA3P34903 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.5■□□□□ 0.87
GABRA3P34903 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.5■□□□□ 0.87
GABRA3P34903 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GABRA3P34903 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GABRA3P34903 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.5■□□□□ 0.87
GABRA3P34903 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
GABRA3P34903 AC092171.4-201ENST00000609130 632 ntBASIC20.5■□□□□ 0.87
GABRA3P34903 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
GABRA3P34903 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
GABRA3P34903 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.5■□□□□ 0.87
GABRA3P34903 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
GABRA3P34903 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GABRA3P34903 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GABRA3P34903 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GABRA3P34903 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GABRA3P34903 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GABRA3P34903 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
GABRA3P34903 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GABRA3P34903 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
GABRA3P34903 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GABRA3P34903 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
GABRA3P34903 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GABRA3P34903 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GABRA3P34903 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
GABRA3P34903 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GABRA3P34903 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.49■□□□□ 0.87
GABRA3P34903 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.49■□□□□ 0.87
GABRA3P34903 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
GABRA3P34903 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GABRA3P34903 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
GABRA3P34903 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GABRA3P34903 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
GABRA3P34903 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GABRA3P34903 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GABRA3P34903 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GABRA3P34903 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GABRA3P34903 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GABRA3P34903 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GABRA3P34903 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GABRA3P34903 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GABRA3P34903 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.48■□□□□ 0.87
GABRA3P34903 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
GABRA3P34903 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
GABRA3P34903 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GABRA3P34903 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
GABRA3P34903 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GABRA3P34903 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.47■□□□□ 0.87
GABRA3P34903 MIR3181-201ENST00000578512 73 ntBASIC20.47■□□□□ 0.87
GABRA3P34903 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
GABRA3P34903 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.47■□□□□ 0.87
GABRA3P34903 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GABRA3P34903 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
GABRA3P34903 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GABRA3P34903 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GABRA3P34903 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GABRA3P34903 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GABRA3P34903 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GABRA3P34903 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.46■□□□□ 0.87
GABRA3P34903 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GABRA3P34903 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GABRA3P34903 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.46■□□□□ 0.87
GABRA3P34903 AL136116.3-201ENST00000402907 1138 ntBASIC20.46■□□□□ 0.87
GABRA3P34903 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.46■□□□□ 0.87
GABRA3P34903 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.46■□□□□ 0.87
GABRA3P34903 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GABRA3P34903 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
GABRA3P34903 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GABRA3P34903 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GABRA3P34903 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.46■□□□□ 0.87
GABRA3P34903 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GABRA3P34903 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GABRA3P34903 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.87
GABRA3P34903 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
GABRA3P34903 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GABRA3P34903 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
GABRA3P34903 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GABRA3P34903 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GABRA3P34903 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GABRA3P34903 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
GABRA3P34903 ESRRAP2-201ENST00000418437 1549 ntBASIC20.45■□□□□ 0.86
GABRA3P34903 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GABRA3P34903 AC133637.1-201ENST00000624115 1537 ntBASIC20.45■□□□□ 0.86
GABRA3P34903 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.45■□□□□ 0.86
GABRA3P34903 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.45■□□□□ 0.86
GABRA3P34903 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.45■□□□□ 0.86
GABRA3P34903 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
GABRA3P34903 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GABRA3P34903 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
GABRA3P34903 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.44■□□□□ 0.86
GABRA3P34903 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.44■□□□□ 0.86
GABRA3P34903 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.44■□□□□ 0.86
GABRA3P34903 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GABRA3P34903 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms