Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
CPS1P31327 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
CPS1P31327 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
CPS1P31327 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC31.7■■■□□ 2.66
CPS1P31327 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC31.69■■■□□ 2.66
CPS1P31327 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CPS1P31327 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
CPS1P31327 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC31.69■■■□□ 2.66
CPS1P31327 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CPS1P31327 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CPS1P31327 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CPS1P31327 MAZ-216ENST00000616501 991 ntTSL 5 BASIC31.69■■■□□ 2.66
CPS1P31327 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CPS1P31327 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CPS1P31327 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CPS1P31327 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CPS1P31327 SLC29A4P1-201ENST00000398760 971 ntBASIC31.68■■■□□ 2.66
CPS1P31327 AC073210.2-201ENST00000430369 194 ntBASIC31.68■■■□□ 2.66
CPS1P31327 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC31.68■■■□□ 2.66
CPS1P31327 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC31.68■■■□□ 2.66
CPS1P31327 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC31.68■■■□□ 2.66
CPS1P31327 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC31.67■■■□□ 2.66
CPS1P31327 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC31.67■■■□□ 2.66
CPS1P31327 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
CPS1P31327 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CPS1P31327 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
CPS1P31327 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CPS1P31327 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
CPS1P31327 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC31.66■■■□□ 2.66
CPS1P31327 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CPS1P31327 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CPS1P31327 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC31.65■■■□□ 2.66
CPS1P31327 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CPS1P31327 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC31.65■■■□□ 2.66
CPS1P31327 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC31.65■■■□□ 2.66
CPS1P31327 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CPS1P31327 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CPS1P31327 AC231657.2-201ENST00000624556 255 ntBASIC31.65■■■□□ 2.66
CPS1P31327 PFKL-212ENST00000628044 129 ntTSL 3 BASIC31.65■■■□□ 2.66
CPS1P31327 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CPS1P31327 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
CPS1P31327 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC31.64■■■□□ 2.66
CPS1P31327 PRORSD1P-201ENST00000295112 541 ntBASIC31.64■■■□□ 2.66
CPS1P31327 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC31.64■■■□□ 2.66
CPS1P31327 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
CPS1P31327 RPS2P52-201ENST00000469610 820 ntBASIC31.64■■■□□ 2.66
CPS1P31327 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC31.64■■■□□ 2.66
CPS1P31327 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC31.64■■■□□ 2.66
CPS1P31327 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
CPS1P31327 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CPS1P31327 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC31.63■■■□□ 2.65
CPS1P31327 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CPS1P31327 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CPS1P31327 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC31.63■■■□□ 2.65
CPS1P31327 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC31.63■■■□□ 2.65
CPS1P31327 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CPS1P31327 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CPS1P31327 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC31.62■■■□□ 2.65
CPS1P31327 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CPS1P31327 AC098934.4-201ENST00000564127 592 ntBASIC31.62■■■□□ 2.65
CPS1P31327 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
CPS1P31327 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CPS1P31327 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
CPS1P31327 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
CPS1P31327 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
CPS1P31327 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
CPS1P31327 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC31.61■■■□□ 2.65
CPS1P31327 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
CPS1P31327 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CPS1P31327 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CPS1P31327 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC31.61■■■□□ 2.65
CPS1P31327 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
CPS1P31327 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC31.6■■■□□ 2.65
CPS1P31327 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC31.6■■■□□ 2.65
CPS1P31327 AC133041.1-202ENST00000642053 222 ntBASIC31.6■■■□□ 2.65
CPS1P31327 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC31.6■■■□□ 2.65
CPS1P31327 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CPS1P31327 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CPS1P31327 KRT18P29-201ENST00000397031 1267 ntBASIC31.59■■■□□ 2.65
CPS1P31327 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
CPS1P31327 AC005181.1-201ENST00000604782 1256 ntBASIC31.59■■■□□ 2.65
CPS1P31327 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CPS1P31327 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC31.59■■■□□ 2.65
CPS1P31327 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
CPS1P31327 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
CPS1P31327 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC31.59■■■□□ 2.65
CPS1P31327 AC098590.1-201ENST00000468126 897 ntBASIC31.59■■■□□ 2.65
CPS1P31327 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC31.59■■■□□ 2.65
CPS1P31327 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC31.59■■■□□ 2.65
CPS1P31327 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CPS1P31327 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC31.59■■■□□ 2.65
CPS1P31327 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC31.58■■■□□ 2.65
CPS1P31327 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CPS1P31327 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
CPS1P31327 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CPS1P31327 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC31.58■■■□□ 2.65
CPS1P31327 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC31.58■■■□□ 2.65
CPS1P31327 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CPS1P31327 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC31.58■■■□□ 2.65
CPS1P31327 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms