Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC12P31275 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC12P31275 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXC12P31275 AC093323.1-202ENST00000635031 2045 ntBASIC19.49■□□□□ 0.71
HOXC12P31275 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC12P31275 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
HOXC12P31275 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC12P31275 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.48■□□□□ 0.71
HOXC12P31275 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC12P31275 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.48■□□□□ 0.71
HOXC12P31275 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.48■□□□□ 0.71
HOXC12P31275 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.48■□□□□ 0.71
HOXC12P31275 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.48■□□□□ 0.71
HOXC12P31275 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.48■□□□□ 0.71
HOXC12P31275 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC12P31275 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXC12P31275 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
HOXC12P31275 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC12P31275 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC12P31275 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
HOXC12P31275 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC12P31275 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXC12P31275 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.47■□□□□ 0.71
HOXC12P31275 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
HOXC12P31275 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC12P31275 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC12P31275 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC12P31275 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.46■□□□□ 0.71
HOXC12P31275 AC133637.1-201ENST00000624115 1537 ntBASIC19.46■□□□□ 0.71
HOXC12P31275 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.46■□□□□ 0.71
HOXC12P31275 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.46■□□□□ 0.71
HOXC12P31275 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC12P31275 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC12P31275 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXC12P31275 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.46■□□□□ 0.71
HOXC12P31275 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.46■□□□□ 0.71
HOXC12P31275 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC12P31275 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXC12P31275 AC008764.7-201ENST00000593779 1081 ntBASIC19.46■□□□□ 0.71
HOXC12P31275 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXC12P31275 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC12P31275 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC12P31275 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXC12P31275 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC12P31275 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC12P31275 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HOXC12P31275 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HOXC12P31275 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC12P31275 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC12P31275 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC12P31275 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC12P31275 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXC12P31275 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXC12P31275 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
HOXC12P31275 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.45■□□□□ 0.7
HOXC12P31275 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC12P31275 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXC12P31275 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXC12P31275 AL353803.4-201ENST00000565882 1934 ntBASIC19.45■□□□□ 0.7
HOXC12P31275 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXC12P31275 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HOXC12P31275 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC12P31275 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HOXC12P31275 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC12P31275 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC12P31275 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC12P31275 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC12P31275 AC099791.1-201ENST00000416440 715 ntBASIC19.44■□□□□ 0.7
HOXC12P31275 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXC12P31275 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC12P31275 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXC12P31275 AL499627.2-201ENST00000606283 725 ntBASIC19.44■□□□□ 0.7
HOXC12P31275 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.44■□□□□ 0.7
HOXC12P31275 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXC12P31275 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HOXC12P31275 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXC12P31275 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HOXC12P31275 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HOXC12P31275 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HOXC12P31275 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXC12P31275 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC12P31275 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC12P31275 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HOXC12P31275 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.43■□□□□ 0.7
HOXC12P31275 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXC12P31275 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXC12P31275 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXC12P31275 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
HOXC12P31275 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXC12P31275 ANOS2P-203ENST00000472227 1816 ntBASIC19.42■□□□□ 0.7
HOXC12P31275 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXC12P31275 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXC12P31275 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXC12P31275 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXC12P31275 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC12P31275 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXC12P31275 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC12P31275 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC12P31275 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXC12P31275 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms