Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATF1P18846 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.34■□□□□ 0.69
ATF1P18846 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.34■□□□□ 0.69
ATF1P18846 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.34■□□□□ 0.69
ATF1P18846 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.34■□□□□ 0.69
ATF1P18846 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ATF1P18846 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATF1P18846 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.34■□□□□ 0.69
ATF1P18846 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
ATF1P18846 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATF1P18846 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATF1P18846 AL353803.4-201ENST00000565882 1934 ntBASIC19.33■□□□□ 0.69
ATF1P18846 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATF1P18846 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATF1P18846 AC026310.3-201ENST00000625186 2373 ntBASIC19.33■□□□□ 0.69
ATF1P18846 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.33■□□□□ 0.69
ATF1P18846 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.33■□□□□ 0.69
ATF1P18846 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATF1P18846 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.33■□□□□ 0.68
ATF1P18846 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATF1P18846 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.33■□□□□ 0.68
ATF1P18846 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATF1P18846 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.33■□□□□ 0.68
ATF1P18846 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATF1P18846 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ATF1P18846 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATF1P18846 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.32■□□□□ 0.68
ATF1P18846 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATF1P18846 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
ATF1P18846 AC103834.1-201ENST00000520383 144 ntBASIC19.32■□□□□ 0.68
ATF1P18846 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATF1P18846 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATF1P18846 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATF1P18846 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ATF1P18846 SLC25A24-204ENST00000569674 2357 ntBASIC19.32■□□□□ 0.68
ATF1P18846 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.31■□□□□ 0.68
ATF1P18846 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATF1P18846 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATF1P18846 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATF1P18846 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATF1P18846 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.31■□□□□ 0.68
ATF1P18846 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATF1P18846 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ATF1P18846 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.31■□□□□ 0.68
ATF1P18846 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATF1P18846 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.31■□□□□ 0.68
ATF1P18846 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ATF1P18846 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
ATF1P18846 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF1P18846 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF1P18846 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF1P18846 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF1P18846 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.3■□□□□ 0.68
ATF1P18846 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ATF1P18846 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF1P18846 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF1P18846 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF1P18846 YBX1P4-201ENST00000392794 808 ntBASIC19.3■□□□□ 0.68
ATF1P18846 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ATF1P18846 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.3■□□□□ 0.68
ATF1P18846 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF1P18846 AC087742.1-201ENST00000575880 1738 ntBASIC19.3■□□□□ 0.68
ATF1P18846 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
ATF1P18846 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATF1P18846 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ATF1P18846 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.29■□□□□ 0.68
ATF1P18846 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.29■□□□□ 0.68
ATF1P18846 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATF1P18846 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATF1P18846 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATF1P18846 KRT8P33-201ENST00000508125 1423 ntBASIC19.29■□□□□ 0.68
ATF1P18846 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATF1P18846 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ATF1P18846 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATF1P18846 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATF1P18846 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ATF1P18846 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATF1P18846 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATF1P18846 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ATF1P18846 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATF1P18846 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATF1P18846 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.28■□□□□ 0.68
ATF1P18846 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.28■□□□□ 0.68
ATF1P18846 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ATF1P18846 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATF1P18846 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF1P18846 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.28■□□□□ 0.68
ATF1P18846 AC103724.3-201ENST00000564481 992 ntBASIC19.28■□□□□ 0.68
ATF1P18846 SNX5-217ENST00000606557 1087 ntBASIC19.28■□□□□ 0.68
ATF1P18846 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF1P18846 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF1P18846 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATF1P18846 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.28■□□□□ 0.68
ATF1P18846 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATF1P18846 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATF1P18846 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATF1P18846 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATF1P18846 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATF1P18846 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ATF1P18846 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms