Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.66■■□□□ 1.06
NELFEP18615 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NELFEP18615 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NELFEP18615 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NELFEP18615 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NELFEP18615 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NELFEP18615 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NELFEP18615 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.65■■□□□ 1.06
NELFEP18615 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.65■■□□□ 1.06
NELFEP18615 MIR4767-201ENST00000582827 78 ntBASIC21.65■■□□□ 1.06
NELFEP18615 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.65■■□□□ 1.06
NELFEP18615 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NELFEP18615 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NELFEP18615 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
NELFEP18615 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NELFEP18615 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.64■■□□□ 1.06
NELFEP18615 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NELFEP18615 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NELFEP18615 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NELFEP18615 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.64■■□□□ 1.06
NELFEP18615 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NELFEP18615 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.64■■□□□ 1.05
NELFEP18615 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
NELFEP18615 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NELFEP18615 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NELFEP18615 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.64■■□□□ 1.05
NELFEP18615 AL136967.2-201ENST00000623968 743 ntBASIC21.64■■□□□ 1.05
NELFEP18615 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.64■■□□□ 1.05
NELFEP18615 AL024507.2-201ENST00000606070 2574 ntBASIC21.64■■□□□ 1.05
NELFEP18615 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NELFEP18615 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.63■■□□□ 1.05
NELFEP18615 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NELFEP18615 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NELFEP18615 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NELFEP18615 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NELFEP18615 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NELFEP18615 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.63■■□□□ 1.05
NELFEP18615 AF213884.3-201ENST00000563833 479 ntBASIC21.63■■□□□ 1.05
NELFEP18615 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.63■■□□□ 1.05
NELFEP18615 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NELFEP18615 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NELFEP18615 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.62■■□□□ 1.05
NELFEP18615 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.62■■□□□ 1.05
NELFEP18615 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NELFEP18615 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
NELFEP18615 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.62■■□□□ 1.05
NELFEP18615 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
NELFEP18615 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.62■■□□□ 1.05
NELFEP18615 MIR939-201ENST00000401314 82 ntBASIC21.62■■□□□ 1.05
NELFEP18615 ZNRF2P3-201ENST00000424200 374 ntBASIC21.62■■□□□ 1.05
NELFEP18615 AP001330.3-201ENST00000520123 633 ntBASIC21.62■■□□□ 1.05
NELFEP18615 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.62■■□□□ 1.05
NELFEP18615 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.62■■□□□ 1.05
NELFEP18615 AC009086.3-201ENST00000623486 1008 ntBASIC21.62■■□□□ 1.05
NELFEP18615 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NELFEP18615 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NELFEP18615 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.61■■□□□ 1.05
NELFEP18615 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.61■■□□□ 1.05
NELFEP18615 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.61■■□□□ 1.05
NELFEP18615 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NELFEP18615 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
NELFEP18615 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NELFEP18615 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.61■■□□□ 1.05
NELFEP18615 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NELFEP18615 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
NELFEP18615 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
NELFEP18615 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.61■■□□□ 1.05
NELFEP18615 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.61■■□□□ 1.05
NELFEP18615 AC006455.2-201ENST00000429931 906 ntBASIC21.61■■□□□ 1.05
NELFEP18615 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
NELFEP18615 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NELFEP18615 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
NELFEP18615 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NELFEP18615 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
NELFEP18615 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NELFEP18615 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NELFEP18615 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NELFEP18615 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
NELFEP18615 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NELFEP18615 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.6■■□□□ 1.05
NELFEP18615 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.6■■□□□ 1.05
NELFEP18615 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NELFEP18615 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
NELFEP18615 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.59■■□□□ 1.05
NELFEP18615 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NELFEP18615 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
NELFEP18615 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.59■■□□□ 1.05
NELFEP18615 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
NELFEP18615 AC091305.1-201ENST00000479476 895 ntBASIC21.59■■□□□ 1.05
NELFEP18615 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
NELFEP18615 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NELFEP18615 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
NELFEP18615 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NELFEP18615 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NELFEP18615 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
NELFEP18615 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NELFEP18615 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NELFEP18615 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
NELFEP18615 MIR3181-201ENST00000578512 73 ntBASIC21.58■■□□□ 1.05
NELFEP18615 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms