Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRKCAP17252 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRKCAP17252 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRKCAP17252 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRKCAP17252 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRKCAP17252 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRKCAP17252 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRKCAP17252 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PRKCAP17252 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRKCAP17252 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PRKCAP17252 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.3■□□□□ 0.84
PRKCAP17252 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRKCAP17252 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.3■□□□□ 0.84
PRKCAP17252 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.3■□□□□ 0.84
PRKCAP17252 AC131281.2-201ENST00000520478 145 ntBASIC20.3■□□□□ 0.84
PRKCAP17252 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRKCAP17252 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRKCAP17252 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.3■□□□□ 0.84
PRKCAP17252 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.3■□□□□ 0.84
PRKCAP17252 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PRKCAP17252 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
PRKCAP17252 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRKCAP17252 AL353803.4-201ENST00000565882 1934 ntBASIC20.29■□□□□ 0.84
PRKCAP17252 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.29■□□□□ 0.84
PRKCAP17252 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRKCAP17252 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.29■□□□□ 0.84
PRKCAP17252 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRKCAP17252 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRKCAP17252 LINC01529-204ENST00000636474 1715 ntBASIC20.29■□□□□ 0.84
PRKCAP17252 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.29■□□□□ 0.84
PRKCAP17252 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRKCAP17252 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.29■□□□□ 0.84
PRKCAP17252 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.28■□□□□ 0.84
PRKCAP17252 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.28■□□□□ 0.84
PRKCAP17252 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.28■□□□□ 0.84
PRKCAP17252 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRKCAP17252 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRKCAP17252 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRKCAP17252 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRKCAP17252 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRKCAP17252 MIR4466-201ENST00000606121 54 ntBASIC20.28■□□□□ 0.84
PRKCAP17252 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRKCAP17252 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PRKCAP17252 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PRKCAP17252 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRKCAP17252 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRKCAP17252 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRKCAP17252 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRKCAP17252 AL117328.2-201ENST00000624617 1940 ntBASIC20.27■□□□□ 0.84
PRKCAP17252 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRKCAP17252 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRKCAP17252 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PRKCAP17252 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.27■□□□□ 0.84
PRKCAP17252 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRKCAP17252 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PRKCAP17252 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.27■□□□□ 0.84
PRKCAP17252 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PRKCAP17252 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.27■□□□□ 0.83
PRKCAP17252 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PRKCAP17252 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PRKCAP17252 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PRKCAP17252 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRKCAP17252 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
PRKCAP17252 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRKCAP17252 SRD5A1P1-201ENST00000442297 786 ntBASIC20.26■□□□□ 0.83
PRKCAP17252 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.26■□□□□ 0.83
PRKCAP17252 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PRKCAP17252 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRKCAP17252 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.26■□□□□ 0.83
PRKCAP17252 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.26■□□□□ 0.83
PRKCAP17252 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRKCAP17252 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRKCAP17252 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.26■□□□□ 0.83
PRKCAP17252 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRKCAP17252 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRKCAP17252 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRKCAP17252 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRKCAP17252 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRKCAP17252 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRKCAP17252 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRKCAP17252 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRKCAP17252 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.25■□□□□ 0.83
PRKCAP17252 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRKCAP17252 DUX4L4-201ENST00000566884 1269 ntBASIC20.25■□□□□ 0.83
PRKCAP17252 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRKCAP17252 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
PRKCAP17252 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRKCAP17252 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRKCAP17252 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRKCAP17252 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.24■□□□□ 0.83
PRKCAP17252 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PRKCAP17252 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PRKCAP17252 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRKCAP17252 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRKCAP17252 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRKCAP17252 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.24■□□□□ 0.83
PRKCAP17252 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.24■□□□□ 0.83
PRKCAP17252 AC241377.3-202ENST00000626088 1088 ntBASIC20.24■□□□□ 0.83
PRKCAP17252 AC241585.3-202ENST00000628937 1088 ntBASIC20.24■□□□□ 0.83
PRKCAP17252 AC245100.8-202ENST00000629247 1058 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms