Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.77■□□□□ 0.76
HLA-DOBP13765 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOBP13765 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HLA-DOBP13765 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOBP13765 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DOBP13765 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOBP13765 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOBP13765 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOBP13765 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOBP13765 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOBP13765 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DOBP13765 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DOBP13765 AC131281.2-201ENST00000520478 145 ntBASIC19.76■□□□□ 0.75
HLA-DOBP13765 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOBP13765 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.76■□□□□ 0.75
HLA-DOBP13765 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.76■□□□□ 0.75
HLA-DOBP13765 AC241377.3-202ENST00000626088 1088 ntBASIC19.76■□□□□ 0.75
HLA-DOBP13765 AC241585.3-202ENST00000628937 1088 ntBASIC19.76■□□□□ 0.75
HLA-DOBP13765 AC245100.8-202ENST00000629247 1058 ntBASIC19.76■□□□□ 0.75
HLA-DOBP13765 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOBP13765 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOBP13765 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOBP13765 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOBP13765 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.76■□□□□ 0.75
HLA-DOBP13765 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOBP13765 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DOBP13765 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.75■□□□□ 0.75
HLA-DOBP13765 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.75■□□□□ 0.75
HLA-DOBP13765 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.75■□□□□ 0.75
HLA-DOBP13765 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
HLA-DOBP13765 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOBP13765 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOBP13765 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOBP13765 SRD5A1P1-201ENST00000442297 786 ntBASIC19.75■□□□□ 0.75
HLA-DOBP13765 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOBP13765 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
HLA-DOBP13765 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HLA-DOBP13765 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOBP13765 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOBP13765 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOBP13765 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.75■□□□□ 0.75
HLA-DOBP13765 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HLA-DOBP13765 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOBP13765 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DOBP13765 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DOBP13765 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HLA-DOBP13765 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.74■□□□□ 0.75
HLA-DOBP13765 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DOBP13765 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DOBP13765 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.74■□□□□ 0.75
HLA-DOBP13765 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DOBP13765 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DOBP13765 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
HLA-DOBP13765 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.74■□□□□ 0.75
HLA-DOBP13765 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DOBP13765 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HLA-DOBP13765 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HLA-DOBP13765 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DOBP13765 AL117328.2-201ENST00000624617 1940 ntBASIC19.73■□□□□ 0.75
HLA-DOBP13765 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.73■□□□□ 0.75
HLA-DOBP13765 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.73■□□□□ 0.75
HLA-DOBP13765 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.73■□□□□ 0.75
HLA-DOBP13765 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
HLA-DOBP13765 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.73■□□□□ 0.75
HLA-DOBP13765 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.73■□□□□ 0.75
HLA-DOBP13765 AL499627.2-201ENST00000606283 725 ntBASIC19.73■□□□□ 0.75
HLA-DOBP13765 AC131212.1-201ENST00000613771 668 ntBASIC19.73■□□□□ 0.75
HLA-DOBP13765 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
HLA-DOBP13765 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DOBP13765 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DOBP13765 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DOBP13765 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DOBP13765 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DOBP13765 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DOBP13765 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HLA-DOBP13765 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DOBP13765 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
HLA-DOBP13765 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.72■□□□□ 0.75
HLA-DOBP13765 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
HLA-DOBP13765 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DOBP13765 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DOBP13765 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DOBP13765 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DOBP13765 AC087742.1-201ENST00000575880 1738 ntBASIC19.72■□□□□ 0.75
HLA-DOBP13765 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.72■□□□□ 0.75
HLA-DOBP13765 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.72■□□□□ 0.75
HLA-DOBP13765 pRNA.6-201ENST00000610482 90 ntBASIC19.72■□□□□ 0.75
HLA-DOBP13765 pRNA.5-201ENST00000612139 90 ntBASIC19.72■□□□□ 0.75
HLA-DOBP13765 pRNA.11-201ENST00000618423 90 ntBASIC19.72■□□□□ 0.75
HLA-DOBP13765 pRNA.13-201ENST00000619112 90 ntBASIC19.72■□□□□ 0.75
HLA-DOBP13765 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DOBP13765 GUSBP5-202ENST00000510805 1989 ntBASIC19.72■□□□□ 0.75
HLA-DOBP13765 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DOBP13765 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DOBP13765 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.71■□□□□ 0.75
HLA-DOBP13765 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DOBP13765 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DOBP13765 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.71■□□□□ 0.75
HLA-DOBP13765 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.71■□□□□ 0.75
HLA-DOBP13765 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms