Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.03■□□□□ 0.96
CCL4P13236 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.03■□□□□ 0.96
CCL4P13236 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.03■□□□□ 0.96
CCL4P13236 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.03■□□□□ 0.96
CCL4P13236 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.03■□□□□ 0.96
CCL4P13236 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.03■□□□□ 0.96
CCL4P13236 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
CCL4P13236 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCL4P13236 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.03■□□□□ 0.96
CCL4P13236 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCL4P13236 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCL4P13236 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CCL4P13236 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCL4P13236 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCL4P13236 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCL4P13236 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.02■□□□□ 0.96
CCL4P13236 LINC00543-201ENST00000567234 1845 ntBASIC21.02■□□□□ 0.96
CCL4P13236 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCL4P13236 AC004812.2-201ENST00000611079 2094 ntBASIC21.02■□□□□ 0.96
CCL4P13236 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCL4P13236 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.02■□□□□ 0.96
CCL4P13236 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.02■□□□□ 0.96
CCL4P13236 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.02■□□□□ 0.96
CCL4P13236 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.02■□□□□ 0.96
CCL4P13236 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
CCL4P13236 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCL4P13236 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.01■□□□□ 0.95
CCL4P13236 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCL4P13236 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCL4P13236 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.01■□□□□ 0.95
CCL4P13236 KRT18P61-201ENST00000585825 1298 ntBASIC21.01■□□□□ 0.95
CCL4P13236 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCL4P13236 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.01■□□□□ 0.95
CCL4P13236 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21■□□□□ 0.95
CCL4P13236 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21■□□□□ 0.95
CCL4P13236 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CCL4P13236 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21■□□□□ 0.95
CCL4P13236 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21■□□□□ 0.95
CCL4P13236 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21■□□□□ 0.95
CCL4P13236 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21■□□□□ 0.95
CCL4P13236 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21■□□□□ 0.95
CCL4P13236 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCL4P13236 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCL4P13236 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCL4P13236 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCL4P13236 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCL4P13236 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCL4P13236 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCL4P13236 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCL4P13236 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCL4P13236 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.99■□□□□ 0.95
CCL4P13236 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.99■□□□□ 0.95
CCL4P13236 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.99■□□□□ 0.95
CCL4P13236 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.99■□□□□ 0.95
CCL4P13236 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCL4P13236 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCL4P13236 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CCL4P13236 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCL4P13236 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CCL4P13236 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CCL4P13236 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCL4P13236 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCL4P13236 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.98■□□□□ 0.95
CCL4P13236 TPRG1LP1-201ENST00000598702 760 ntBASIC20.98■□□□□ 0.95
CCL4P13236 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.98■□□□□ 0.95
CCL4P13236 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CCL4P13236 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCL4P13236 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCL4P13236 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CCL4P13236 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.97■□□□□ 0.95
CCL4P13236 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCL4P13236 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCL4P13236 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCL4P13236 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.97■□□□□ 0.95
CCL4P13236 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.97■□□□□ 0.95
CCL4P13236 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCL4P13236 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCL4P13236 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCL4P13236 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCL4P13236 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.96■□□□□ 0.95
CCL4P13236 AL353803.4-201ENST00000565882 1934 ntBASIC20.96■□□□□ 0.95
CCL4P13236 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CCL4P13236 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCL4P13236 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCL4P13236 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCL4P13236 ID1-201ENST00000376105 1233 ntBASIC20.96■□□□□ 0.95
CCL4P13236 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.96■□□□□ 0.95
CCL4P13236 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.96■□□□□ 0.95
CCL4P13236 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCL4P13236 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCL4P13236 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CCL4P13236 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
CCL4P13236 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.95■□□□□ 0.94
CCL4P13236 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.95■□□□□ 0.94
CCL4P13236 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.95■□□□□ 0.94
CCL4P13236 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.95■□□□□ 0.94
CCL4P13236 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.95■□□□□ 0.94
CCL4P13236 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCL4P13236 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCL4P13236 ABCB10P4-201ENST00000566803 2184 ntBASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms