Protein–RNA interactions for Protein: P0CG21

NHLRC4, NHL-repeat-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4P0CG21 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NHLRC4P0CG21 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.23■□□□□ 0.19
NHLRC4P0CG21 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.23■□□□□ 0.19
NHLRC4P0CG21 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NHLRC4P0CG21 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC16.22■□□□□ 0.19
NHLRC4P0CG21 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.22■□□□□ 0.19
NHLRC4P0CG21 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC4P0CG21 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
NHLRC4P0CG21 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC4P0CG21 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC4P0CG21 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC4P0CG21 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.22■□□□□ 0.19
NHLRC4P0CG21 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.22■□□□□ 0.19
NHLRC4P0CG21 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.22■□□□□ 0.19
NHLRC4P0CG21 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.22■□□□□ 0.19
NHLRC4P0CG21 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.22■□□□□ 0.19
NHLRC4P0CG21 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.22■□□□□ 0.19
NHLRC4P0CG21 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.22■□□□□ 0.19
NHLRC4P0CG21 FP325331.1-202ENST00000623531 1380 ntBASIC16.22■□□□□ 0.19
NHLRC4P0CG21 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC4P0CG21 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
NHLRC4P0CG21 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC4P0CG21 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC4P0CG21 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NHLRC4P0CG21 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NHLRC4P0CG21 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NHLRC4P0CG21 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NHLRC4P0CG21 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NHLRC4P0CG21 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NHLRC4P0CG21 KRT19P1-201ENST00000405746 1186 ntBASIC16.21■□□□□ 0.19
NHLRC4P0CG21 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NHLRC4P0CG21 KRT18P11-201ENST00000435214 1283 ntBASIC16.21■□□□□ 0.19
NHLRC4P0CG21 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NHLRC4P0CG21 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.21■□□□□ 0.19
NHLRC4P0CG21 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.21■□□□□ 0.19
NHLRC4P0CG21 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.21■□□□□ 0.19
NHLRC4P0CG21 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NHLRC4P0CG21 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.21■□□□□ 0.19
NHLRC4P0CG21 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NHLRC4P0CG21 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.21■□□□□ 0.19
NHLRC4P0CG21 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.21■□□□□ 0.18
NHLRC4P0CG21 ALDH1A3-203ENST00000557963 1670 ntBASIC16.21■□□□□ 0.18
NHLRC4P0CG21 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NHLRC4P0CG21 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NHLRC4P0CG21 ESRRAP2-201ENST00000418437 1549 ntBASIC16.19■□□□□ 0.18
NHLRC4P0CG21 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NHLRC4P0CG21 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.19■□□□□ 0.18
NHLRC4P0CG21 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NHLRC4P0CG21 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NHLRC4P0CG21 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NHLRC4P0CG21 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NHLRC4P0CG21 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.19■□□□□ 0.18
NHLRC4P0CG21 AL355802.2-201ENST00000402069 882 ntBASIC16.19■□□□□ 0.18
NHLRC4P0CG21 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.19■□□□□ 0.18
NHLRC4P0CG21 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.19■□□□□ 0.18
NHLRC4P0CG21 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NHLRC4P0CG21 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NHLRC4P0CG21 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NHLRC4P0CG21 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NHLRC4P0CG21 SLC6A10P-202ENST00000431994 2058 ntBASIC16.18■□□□□ 0.18
NHLRC4P0CG21 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.18■□□□□ 0.18
NHLRC4P0CG21 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
NHLRC4P0CG21 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NHLRC4P0CG21 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.18■□□□□ 0.18
NHLRC4P0CG21 NCF1B-203ENST00000435988 1254 ntBASIC16.18■□□□□ 0.18
NHLRC4P0CG21 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.18■□□□□ 0.18
NHLRC4P0CG21 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.18■□□□□ 0.18
NHLRC4P0CG21 DUX4L4-201ENST00000566884 1269 ntBASIC16.18■□□□□ 0.18
NHLRC4P0CG21 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.18■□□□□ 0.18
NHLRC4P0CG21 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.18■□□□□ 0.18
NHLRC4P0CG21 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.18■□□□□ 0.18
NHLRC4P0CG21 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NHLRC4P0CG21 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NHLRC4P0CG21 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NHLRC4P0CG21 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC4P0CG21 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NHLRC4P0CG21 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms