Protein–RNA interactions for Protein: P0CB38

PABPC4L, Polyadenylate-binding protein 4-like, humanhuman

Known RBP Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4LP0CB38 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PABPC4LP0CB38 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PABPC4LP0CB38 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.01■□□□□ 0.95
PABPC4LP0CB38 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
PABPC4LP0CB38 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PABPC4LP0CB38 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PABPC4LP0CB38 FBXW4P1-201ENST00000426721 2239 ntBASIC21■□□□□ 0.95
PABPC4LP0CB38 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
PABPC4LP0CB38 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PABPC4LP0CB38 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PABPC4LP0CB38 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21■□□□□ 0.95
PABPC4LP0CB38 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PABPC4LP0CB38 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21■□□□□ 0.95
PABPC4LP0CB38 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21■□□□□ 0.95
PABPC4LP0CB38 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21■□□□□ 0.95
PABPC4LP0CB38 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PABPC4LP0CB38 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21■□□□□ 0.95
PABPC4LP0CB38 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21■□□□□ 0.95
PABPC4LP0CB38 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC4LP0CB38 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC4LP0CB38 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC4LP0CB38 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC4LP0CB38 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC4LP0CB38 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.99■□□□□ 0.95
PABPC4LP0CB38 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC4LP0CB38 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PABPC4LP0CB38 AL451085.2-201ENST00000605085 799 ntBASIC20.99■□□□□ 0.95
PABPC4LP0CB38 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PABPC4LP0CB38 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC4LP0CB38 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC4LP0CB38 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC4LP0CB38 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.99■□□□□ 0.95
PABPC4LP0CB38 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PABPC4LP0CB38 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC4LP0CB38 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC4LP0CB38 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PABPC4LP0CB38 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PABPC4LP0CB38 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PABPC4LP0CB38 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PABPC4LP0CB38 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PABPC4LP0CB38 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.98■□□□□ 0.95
PABPC4LP0CB38 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PABPC4LP0CB38 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PABPC4LP0CB38 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PABPC4LP0CB38 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.98■□□□□ 0.95
PABPC4LP0CB38 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.98■□□□□ 0.95
PABPC4LP0CB38 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PABPC4LP0CB38 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PABPC4LP0CB38 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PABPC4LP0CB38 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PABPC4LP0CB38 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PABPC4LP0CB38 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PABPC4LP0CB38 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PABPC4LP0CB38 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PABPC4LP0CB38 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.97■□□□□ 0.95
PABPC4LP0CB38 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.97■□□□□ 0.95
PABPC4LP0CB38 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PABPC4LP0CB38 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.97■□□□□ 0.95
PABPC4LP0CB38 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PABPC4LP0CB38 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PABPC4LP0CB38 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PABPC4LP0CB38 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
PABPC4LP0CB38 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PABPC4LP0CB38 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PABPC4LP0CB38 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PABPC4LP0CB38 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PABPC4LP0CB38 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PABPC4LP0CB38 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PABPC4LP0CB38 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PABPC4LP0CB38 AL035685.1-201ENST00000636663 812 ntBASIC20.96■□□□□ 0.95
PABPC4LP0CB38 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PABPC4LP0CB38 AC026310.3-201ENST00000625186 2373 ntBASIC20.96■□□□□ 0.95
PABPC4LP0CB38 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PABPC4LP0CB38 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PABPC4LP0CB38 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.96■□□□□ 0.95
PABPC4LP0CB38 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
PABPC4LP0CB38 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.96■□□□□ 0.95
PABPC4LP0CB38 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PABPC4LP0CB38 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PABPC4LP0CB38 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PABPC4LP0CB38 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.95■□□□□ 0.94
PABPC4LP0CB38 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.95■□□□□ 0.94
PABPC4LP0CB38 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PABPC4LP0CB38 AC009299.2-201ENST00000482477 511 ntBASIC20.95■□□□□ 0.94
PABPC4LP0CB38 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PABPC4LP0CB38 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PABPC4LP0CB38 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PABPC4LP0CB38 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.94■□□□□ 0.94
PABPC4LP0CB38 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PABPC4LP0CB38 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.94■□□□□ 0.94
PABPC4LP0CB38 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.94■□□□□ 0.94
PABPC4LP0CB38 AC004448.1-201ENST00000458332 883 ntBASIC20.94■□□□□ 0.94
PABPC4LP0CB38 Z92544.1-202ENST00000571933 1220 ntBASIC20.94■□□□□ 0.94
PABPC4LP0CB38 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PABPC4LP0CB38 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
PABPC4LP0CB38 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PABPC4LP0CB38 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.94■□□□□ 0.94
PABPC4LP0CB38 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.94■□□□□ 0.94
PABPC4LP0CB38 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PABPC4LP0CB38 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms