Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 GUSBP5-202ENST00000510805 1989 ntBASIC21.63■■□□□ 1.05
CAPN1P07384 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN1P07384 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CAPN1P07384 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN1P07384 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN1P07384 MIR935-201ENST00000401179 91 ntBASIC21.62■■□□□ 1.05
CAPN1P07384 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CAPN1P07384 AC106739.1-201ENST00000617035 715 ntBASIC21.62■■□□□ 1.05
CAPN1P07384 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN1P07384 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN1P07384 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CAPN1P07384 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.61■■□□□ 1.05
CAPN1P07384 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.61■■□□□ 1.05
CAPN1P07384 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CAPN1P07384 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CAPN1P07384 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CAPN1P07384 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CAPN1P07384 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CAPN1P07384 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.6■■□□□ 1.05
CAPN1P07384 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CAPN1P07384 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CAPN1P07384 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.6■■□□□ 1.05
CAPN1P07384 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.6■■□□□ 1.05
CAPN1P07384 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CAPN1P07384 AC144652.1-201ENST00000609974 1624 ntBASIC21.6■■□□□ 1.05
CAPN1P07384 UNC93B3-201ENST00000308076 687 ntBASIC21.6■■□□□ 1.05
CAPN1P07384 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CAPN1P07384 SRD5A1P1-201ENST00000442297 786 ntBASIC21.6■■□□□ 1.05
CAPN1P07384 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CAPN1P07384 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CAPN1P07384 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CAPN1P07384 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.6■■□□□ 1.05
CAPN1P07384 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.6■■□□□ 1.05
CAPN1P07384 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CAPN1P07384 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CAPN1P07384 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CAPN1P07384 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CAPN1P07384 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CAPN1P07384 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CAPN1P07384 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CAPN1P07384 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CAPN1P07384 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.59■■□□□ 1.05
CAPN1P07384 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.59■■□□□ 1.05
CAPN1P07384 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CAPN1P07384 PBX2P1-201ENST00000493219 1291 ntBASIC21.59■■□□□ 1.05
CAPN1P07384 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.59■■□□□ 1.05
CAPN1P07384 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CAPN1P07384 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CAPN1P07384 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CAPN1P07384 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CAPN1P07384 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CAPN1P07384 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.58■■□□□ 1.05
CAPN1P07384 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.58■■□□□ 1.05
CAPN1P07384 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.58■■□□□ 1.05
CAPN1P07384 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.58■■□□□ 1.05
CAPN1P07384 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CAPN1P07384 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CAPN1P07384 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN1P07384 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN1P07384 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
CAPN1P07384 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.57■■□□□ 1.04
CAPN1P07384 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN1P07384 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN1P07384 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN1P07384 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN1P07384 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CAPN1P07384 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN1P07384 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.57■■□□□ 1.04
CAPN1P07384 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN1P07384 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN1P07384 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN1P07384 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN1P07384 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN1P07384 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN1P07384 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.56■■□□□ 1.04
CAPN1P07384 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.56■■□□□ 1.04
CAPN1P07384 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.56■■□□□ 1.04
CAPN1P07384 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.56■■□□□ 1.04
CAPN1P07384 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.56■■□□□ 1.04
CAPN1P07384 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN1P07384 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN1P07384 AL031432.3-201ENST00000607698 485 ntBASIC21.56■■□□□ 1.04
CAPN1P07384 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CAPN1P07384 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN1P07384 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN1P07384 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.56■■□□□ 1.04
CAPN1P07384 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN1P07384 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN1P07384 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN1P07384 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN1P07384 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.55■■□□□ 1.04
CAPN1P07384 AL136162.1-201ENST00000607711 1078 ntBASIC21.55■■□□□ 1.04
CAPN1P07384 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN1P07384 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN1P07384 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN1P07384 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN1P07384 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CAPN1P07384 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN1P07384 ESRRAP2-201ENST00000418437 1549 ntBASIC21.55■■□□□ 1.04
CAPN1P07384 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms