Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DPB1P04440 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
HLA-DPB1P04440 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HLA-DPB1P04440 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DPB1P04440 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DPB1P04440 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
HLA-DPB1P04440 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DPB1P04440 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DPB1P04440 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HLA-DPB1P04440 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HLA-DPB1P04440 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HLA-DPB1P04440 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DPB1P04440 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
HLA-DPB1P04440 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DPB1P04440 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
HLA-DPB1P04440 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DPB1P04440 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DPB1P04440 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DPB1P04440 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.75■□□□□ 0.75
HLA-DPB1P04440 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.75■□□□□ 0.75
HLA-DPB1P04440 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DPB1P04440 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.75■□□□□ 0.75
HLA-DPB1P04440 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
HLA-DPB1P04440 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.75■□□□□ 0.75
HLA-DPB1P04440 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DPB1P04440 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DPB1P04440 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HLA-DPB1P04440 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DPB1P04440 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HLA-DPB1P04440 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.74■□□□□ 0.75
HLA-DPB1P04440 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DPB1P04440 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.74■□□□□ 0.75
HLA-DPB1P04440 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.74■□□□□ 0.75
HLA-DPB1P04440 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HLA-DPB1P04440 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
HLA-DPB1P04440 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
HLA-DPB1P04440 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
HLA-DPB1P04440 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
HLA-DPB1P04440 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DPB1P04440 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DPB1P04440 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.74■□□□□ 0.75
HLA-DPB1P04440 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DPB1P04440 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DPB1P04440 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.74■□□□□ 0.75
HLA-DPB1P04440 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 AC079630.1-202ENST00000618127 1840 ntBASIC19.73■□□□□ 0.75
HLA-DPB1P04440 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DPB1P04440 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DPB1P04440 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DPB1P04440 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.72■□□□□ 0.75
HLA-DPB1P04440 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DPB1P04440 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DPB1P04440 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DPB1P04440 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.72■□□□□ 0.75
HLA-DPB1P04440 AF131216.4-201ENST00000638924 1588 ntBASIC19.72■□□□□ 0.75
HLA-DPB1P04440 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.72■□□□□ 0.75
HLA-DPB1P04440 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DPB1P04440 FBXW4P1-201ENST00000426721 2239 ntBASIC19.72■□□□□ 0.75
HLA-DPB1P04440 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.72■□□□□ 0.75
HLA-DPB1P04440 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DPB1P04440 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPB1P04440 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPB1P04440 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.71■□□□□ 0.75
HLA-DPB1P04440 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPB1P04440 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPB1P04440 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.71■□□□□ 0.75
HLA-DPB1P04440 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPB1P04440 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPB1P04440 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPB1P04440 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPB1P04440 AL451085.2-201ENST00000605085 799 ntBASIC19.71■□□□□ 0.75
HLA-DPB1P04440 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPB1P04440 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPB1P04440 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPB1P04440 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPB1P04440 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DPB1P04440 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DPB1P04440 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DPB1P04440 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms