Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LCATP04180 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCATP04180 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LCATP04180 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCATP04180 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCATP04180 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LCATP04180 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.22■□□□□ 0.67
LCATP04180 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LCATP04180 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCATP04180 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCATP04180 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LCATP04180 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.22■□□□□ 0.67
LCATP04180 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.22■□□□□ 0.67
LCATP04180 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.22■□□□□ 0.67
LCATP04180 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LCATP04180 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCATP04180 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LCATP04180 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LCATP04180 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LCATP04180 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
LCATP04180 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCATP04180 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCATP04180 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LCATP04180 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCATP04180 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LCATP04180 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.21■□□□□ 0.67
LCATP04180 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCATP04180 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.21■□□□□ 0.67
LCATP04180 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCATP04180 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.21■□□□□ 0.67
LCATP04180 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCATP04180 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCATP04180 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCATP04180 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCATP04180 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
LCATP04180 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCATP04180 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCATP04180 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LCATP04180 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
LCATP04180 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCATP04180 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.2■□□□□ 0.66
LCATP04180 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LCATP04180 AC241377.3-202ENST00000626088 1088 ntBASIC19.2■□□□□ 0.66
LCATP04180 AC241585.3-202ENST00000628937 1088 ntBASIC19.2■□□□□ 0.66
LCATP04180 AC245100.8-202ENST00000629247 1058 ntBASIC19.2■□□□□ 0.66
LCATP04180 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCATP04180 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.2■□□□□ 0.66
LCATP04180 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCATP04180 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCATP04180 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCATP04180 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCATP04180 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCATP04180 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LCATP04180 ESRRAP2-201ENST00000418437 1549 ntBASIC19.2■□□□□ 0.66
LCATP04180 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LCATP04180 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.19■□□□□ 0.66
LCATP04180 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LCATP04180 AL117328.2-201ENST00000624617 1940 ntBASIC19.19■□□□□ 0.66
LCATP04180 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.19■□□□□ 0.66
LCATP04180 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
LCATP04180 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LCATP04180 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LCATP04180 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.19■□□□□ 0.66
LCATP04180 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.19■□□□□ 0.66
LCATP04180 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LCATP04180 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LCATP04180 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LCATP04180 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.19■□□□□ 0.66
LCATP04180 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.19■□□□□ 0.66
LCATP04180 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LCATP04180 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LCATP04180 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LCATP04180 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LCATP04180 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LCATP04180 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.19■□□□□ 0.66
LCATP04180 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LCATP04180 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LCATP04180 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.18■□□□□ 0.66
LCATP04180 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LCATP04180 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCATP04180 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.18■□□□□ 0.66
LCATP04180 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCATP04180 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LCATP04180 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCATP04180 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCATP04180 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCATP04180 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCATP04180 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LCATP04180 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.18■□□□□ 0.66
LCATP04180 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCATP04180 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCATP04180 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LCATP04180 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
LCATP04180 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.17■□□□□ 0.66
LCATP04180 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCATP04180 AC004687.1-201ENST00000579003 1625 ntBASIC19.17■□□□□ 0.66
LCATP04180 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCATP04180 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCATP04180 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.17■□□□□ 0.66
LCATP04180 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms