Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.73■□□□□ 0.75
HLA-DQA2P01906 MTDHP2-201ENST00000601468 714 ntBASIC19.73■□□□□ 0.75
HLA-DQA2P01906 AC092028.1-203ENST00000608262 953 ntBASIC19.73■□□□□ 0.75
HLA-DQA2P01906 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DQA2P01906 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HLA-DQA2P01906 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DQA2P01906 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQA2P01906 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQA2P01906 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
HLA-DQA2P01906 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQA2P01906 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
HLA-DQA2P01906 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQA2P01906 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.72■□□□□ 0.75
HLA-DQA2P01906 Z92544.1-202ENST00000571933 1220 ntBASIC19.72■□□□□ 0.75
HLA-DQA2P01906 MIR4787-201ENST00000607364 84 ntBASIC19.72■□□□□ 0.75
HLA-DQA2P01906 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.72■□□□□ 0.75
HLA-DQA2P01906 LINC01529-204ENST00000636474 1715 ntBASIC19.72■□□□□ 0.75
HLA-DQA2P01906 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQA2P01906 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQA2P01906 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQA2P01906 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.72■□□□□ 0.75
HLA-DQA2P01906 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.72■□□□□ 0.75
HLA-DQA2P01906 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQA2P01906 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.72■□□□□ 0.75
HLA-DQA2P01906 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HLA-DQA2P01906 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.72■□□□□ 0.75
HLA-DQA2P01906 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DQA2P01906 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.71■□□□□ 0.75
HLA-DQA2P01906 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.71■□□□□ 0.75
HLA-DQA2P01906 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DQA2P01906 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DQA2P01906 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DQA2P01906 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.71■□□□□ 0.75
HLA-DQA2P01906 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.71■□□□□ 0.75
HLA-DQA2P01906 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
HLA-DQA2P01906 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DQA2P01906 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DQA2P01906 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DQA2P01906 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
HLA-DQA2P01906 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HLA-DQA2P01906 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DQA2P01906 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HLA-DQA2P01906 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.71■□□□□ 0.75
HLA-DQA2P01906 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQA2P01906 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQA2P01906 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
HLA-DQA2P01906 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQA2P01906 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQA2P01906 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQA2P01906 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.7■□□□□ 0.74
HLA-DQA2P01906 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQA2P01906 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
HLA-DQA2P01906 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQA2P01906 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HLA-DQA2P01906 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HLA-DQA2P01906 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQA2P01906 AC239859.2-201ENST00000444165 318 ntBASIC19.7■□□□□ 0.74
HLA-DQA2P01906 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HLA-DQA2P01906 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.7■□□□□ 0.74
HLA-DQA2P01906 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQA2P01906 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
HLA-DQA2P01906 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQA2P01906 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.7■□□□□ 0.74
HLA-DQA2P01906 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
HLA-DQA2P01906 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DQA2P01906 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DQA2P01906 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.69■□□□□ 0.74
HLA-DQA2P01906 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.69■□□□□ 0.74
HLA-DQA2P01906 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DQA2P01906 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.69■□□□□ 0.74
HLA-DQA2P01906 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.69■□□□□ 0.74
HLA-DQA2P01906 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DQA2P01906 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DQA2P01906 TSPY9P-201ENST00000440215 945 ntBASIC19.69■□□□□ 0.74
HLA-DQA2P01906 TSPY11P-201ENST00000442607 1045 ntBASIC19.69■□□□□ 0.74
HLA-DQA2P01906 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.69■□□□□ 0.74
HLA-DQA2P01906 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DQA2P01906 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DQA2P01906 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.69■□□□□ 0.74
HLA-DQA2P01906 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DQA2P01906 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DQA2P01906 LINC00526-201ENST00000581067 1875 ntBASIC19.69■□□□□ 0.74
HLA-DQA2P01906 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DQA2P01906 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQA2P01906 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HLA-DQA2P01906 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQA2P01906 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HLA-DQA2P01906 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQA2P01906 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
HLA-DQA2P01906 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQA2P01906 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.68■□□□□ 0.74
HLA-DQA2P01906 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQA2P01906 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQA2P01906 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQA2P01906 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
HLA-DQA2P01906 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HLA-DQA2P01906 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HLA-DQA2P01906 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DQA2P01906 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DQA2P01906 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms