Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PGK1P00558 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PGK1P00558 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.81■■□□□ 1.56
PGK1P00558 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PGK1P00558 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.8■■□□□ 1.56
PGK1P00558 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PGK1P00558 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PGK1P00558 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.8■■□□□ 1.56
PGK1P00558 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
PGK1P00558 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PGK1P00558 AC026185.1-201ENST00000445748 174 ntBASIC24.8■■□□□ 1.56
PGK1P00558 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
PGK1P00558 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PGK1P00558 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
PGK1P00558 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PGK1P00558 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PGK1P00558 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PGK1P00558 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.79■■□□□ 1.56
PGK1P00558 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC24.79■■□□□ 1.56
PGK1P00558 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.79■■□□□ 1.56
PGK1P00558 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.79■■□□□ 1.56
PGK1P00558 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PGK1P00558 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
PGK1P00558 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PGK1P00558 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PGK1P00558 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PGK1P00558 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PGK1P00558 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
PGK1P00558 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.78■■□□□ 1.56
PGK1P00558 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
PGK1P00558 AC104771.1-201ENST00000603335 964 ntBASIC24.78■■□□□ 1.56
PGK1P00558 BID-214ENST00000617586 542 ntTSL 5 BASIC24.78■■□□□ 1.56
PGK1P00558 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.78■■□□□ 1.56
PGK1P00558 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PGK1P00558 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
PGK1P00558 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.77■■□□□ 1.56
PGK1P00558 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.77■■□□□ 1.56
PGK1P00558 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PGK1P00558 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PGK1P00558 BX005040.4-201ENST00000637145 1518 ntBASIC24.76■■□□□ 1.55
PGK1P00558 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PGK1P00558 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PGK1P00558 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PGK1P00558 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PGK1P00558 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PGK1P00558 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.76■■□□□ 1.55
PGK1P00558 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC24.76■■□□□ 1.55
PGK1P00558 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PGK1P00558 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.76■■□□□ 1.55
PGK1P00558 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.76■■□□□ 1.55
PGK1P00558 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.76■■□□□ 1.55
PGK1P00558 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
PGK1P00558 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PGK1P00558 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.75■■□□□ 1.55
PGK1P00558 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PGK1P00558 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PGK1P00558 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PGK1P00558 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PGK1P00558 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PGK1P00558 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PGK1P00558 CROCCP5-201ENST00000436658 830 ntBASIC24.74■■□□□ 1.55
PGK1P00558 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PGK1P00558 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.74■■□□□ 1.55
PGK1P00558 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.74■■□□□ 1.55
PGK1P00558 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PGK1P00558 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PGK1P00558 AC138932.3-201ENST00000567634 1902 ntBASIC24.74■■□□□ 1.55
PGK1P00558 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PGK1P00558 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PGK1P00558 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PGK1P00558 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PGK1P00558 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PGK1P00558 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PGK1P00558 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PGK1P00558 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.73■■□□□ 1.55
PGK1P00558 AC006970.2-201ENST00000450065 779 ntBASIC24.73■■□□□ 1.55
PGK1P00558 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
PGK1P00558 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.73■■□□□ 1.55
PGK1P00558 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.73■■□□□ 1.55
PGK1P00558 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC24.73■■□□□ 1.55
PGK1P00558 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PGK1P00558 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.73■■□□□ 1.55
PGK1P00558 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PGK1P00558 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.73■■□□□ 1.55
PGK1P00558 AC004687.1-201ENST00000579003 1625 ntBASIC24.72■■□□□ 1.55
PGK1P00558 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.72■■□□□ 1.55
PGK1P00558 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PGK1P00558 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
PGK1P00558 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PGK1P00558 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.72■■□□□ 1.55
PGK1P00558 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24.72■■□□□ 1.55
PGK1P00558 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC24.72■■□□□ 1.55
PGK1P00558 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.72■■□□□ 1.55
PGK1P00558 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PGK1P00558 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PGK1P00558 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.71■■□□□ 1.55
PGK1P00558 AL355802.2-201ENST00000402069 882 ntBASIC24.71■■□□□ 1.55
PGK1P00558 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
PGK1P00558 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC24.71■■□□□ 1.55
PGK1P00558 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms