Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC3O95833 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC3O95833 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CLIC3O95833 AL157384.1-201ENST00000445995 2473 ntBASIC20.38■□□□□ 0.85
CLIC3O95833 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC3O95833 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CLIC3O95833 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC3O95833 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC3O95833 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC3O95833 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.37■□□□□ 0.85
CLIC3O95833 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC3O95833 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC3O95833 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLIC3O95833 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.37■□□□□ 0.85
CLIC3O95833 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.37■□□□□ 0.85
CLIC3O95833 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLIC3O95833 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLIC3O95833 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
CLIC3O95833 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.36■□□□□ 0.85
CLIC3O95833 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.36■□□□□ 0.85
CLIC3O95833 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLIC3O95833 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLIC3O95833 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.36■□□□□ 0.85
CLIC3O95833 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLIC3O95833 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC3O95833 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC3O95833 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.35■□□□□ 0.85
CLIC3O95833 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.35■□□□□ 0.85
CLIC3O95833 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC3O95833 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC3O95833 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC3O95833 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.35■□□□□ 0.85
CLIC3O95833 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.35■□□□□ 0.85
CLIC3O95833 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.35■□□□□ 0.85
CLIC3O95833 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC3O95833 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC3O95833 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC3O95833 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC3O95833 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC3O95833 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLIC3O95833 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLIC3O95833 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.34■□□□□ 0.85
CLIC3O95833 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLIC3O95833 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLIC3O95833 AL592295.1-201ENST00000400984 884 ntBASIC20.34■□□□□ 0.85
CLIC3O95833 RPS2P7-201ENST00000447334 885 ntBASIC20.34■□□□□ 0.85
CLIC3O95833 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.34■□□□□ 0.85
CLIC3O95833 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLIC3O95833 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLIC3O95833 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLIC3O95833 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
CLIC3O95833 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CLIC3O95833 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLIC3O95833 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLIC3O95833 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CLIC3O95833 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.33■□□□□ 0.85
CLIC3O95833 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.33■□□□□ 0.85
CLIC3O95833 AC022413.1-201ENST00000624602 984 ntBASIC20.33■□□□□ 0.85
CLIC3O95833 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.33■□□□□ 0.84
CLIC3O95833 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLIC3O95833 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CLIC3O95833 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLIC3O95833 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CLIC3O95833 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.84
CLIC3O95833 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CLIC3O95833 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLIC3O95833 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLIC3O95833 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLIC3O95833 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.32■□□□□ 0.84
CLIC3O95833 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLIC3O95833 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLIC3O95833 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLIC3O95833 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLIC3O95833 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLIC3O95833 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLIC3O95833 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLIC3O95833 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CLIC3O95833 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLIC3O95833 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.32■□□□□ 0.84
CLIC3O95833 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLIC3O95833 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLIC3O95833 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLIC3O95833 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.31■□□□□ 0.84
CLIC3O95833 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLIC3O95833 MIR639-201ENST00000384974 98 ntBASIC20.31■□□□□ 0.84
CLIC3O95833 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLIC3O95833 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLIC3O95833 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLIC3O95833 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLIC3O95833 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.3■□□□□ 0.84
CLIC3O95833 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
CLIC3O95833 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLIC3O95833 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLIC3O95833 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIC3O95833 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLIC3O95833 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CLIC3O95833 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLIC3O95833 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.3■□□□□ 0.84
CLIC3O95833 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.3■□□□□ 0.84
CLIC3O95833 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms