Protein–RNA interactions for Protein: O95551

TDP2, Tyrosyl-DNA phosphodiesterase 2, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2O95551 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
TDP2O95551 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.06■■□□□ 1.6
TDP2O95551 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.06■■□□□ 1.6
TDP2O95551 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.06■■□□□ 1.6
TDP2O95551 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
TDP2O95551 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.06■■□□□ 1.6
TDP2O95551 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
TDP2O95551 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
TDP2O95551 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
TDP2O95551 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.05■■□□□ 1.6
TDP2O95551 OR2I1P-207ENST00000453522 948 ntBASIC25.05■■□□□ 1.6
TDP2O95551 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
TDP2O95551 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
TDP2O95551 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TDP2O95551 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.04■■□□□ 1.6
TDP2O95551 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TDP2O95551 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TDP2O95551 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.04■■□□□ 1.6
TDP2O95551 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TDP2O95551 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.04■■□□□ 1.6
TDP2O95551 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TDP2O95551 SUDS3P1-201ENST00000505831 966 ntBASIC25.04■■□□□ 1.6
TDP2O95551 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
TDP2O95551 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.04■■□□□ 1.6
TDP2O95551 AF213884.3-201ENST00000563833 479 ntBASIC25.04■■□□□ 1.6
TDP2O95551 AL355001.2-201ENST00000620617 1191 ntBASIC25.04■■□□□ 1.6
TDP2O95551 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
TDP2O95551 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TDP2O95551 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.03■■□□□ 1.6
TDP2O95551 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TDP2O95551 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TDP2O95551 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.03■■□□□ 1.6
TDP2O95551 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.03■■□□□ 1.6
TDP2O95551 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.03■■□□□ 1.6
TDP2O95551 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
TDP2O95551 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TDP2O95551 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC25.02■■□□□ 1.6
TDP2O95551 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TDP2O95551 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.02■■□□□ 1.6
TDP2O95551 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
TDP2O95551 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
TDP2O95551 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TDP2O95551 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
TDP2O95551 MIR939-201ENST00000401314 82 ntBASIC25.01■■□□□ 1.59
TDP2O95551 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.01■■□□□ 1.59
TDP2O95551 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.01■■□□□ 1.59
TDP2O95551 AC008764.7-201ENST00000593779 1081 ntBASIC25.01■■□□□ 1.59
TDP2O95551 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
TDP2O95551 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TDP2O95551 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TDP2O95551 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
TDP2O95551 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
TDP2O95551 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
TDP2O95551 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25■■□□□ 1.59
TDP2O95551 BX842568.3-201ENST00000418104 571 ntBASIC25■■□□□ 1.59
TDP2O95551 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25■■□□□ 1.59
TDP2O95551 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25■■□□□ 1.59
TDP2O95551 AL136967.2-201ENST00000623968 743 ntBASIC25■■□□□ 1.59
TDP2O95551 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25■■□□□ 1.59
TDP2O95551 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
TDP2O95551 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25■■□□□ 1.59
TDP2O95551 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
TDP2O95551 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25■■□□□ 1.59
TDP2O95551 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
TDP2O95551 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TDP2O95551 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TDP2O95551 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TDP2O95551 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.99■■□□□ 1.59
TDP2O95551 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TDP2O95551 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
TDP2O95551 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TDP2O95551 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TDP2O95551 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TDP2O95551 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
TDP2O95551 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TDP2O95551 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
TDP2O95551 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TDP2O95551 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
TDP2O95551 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TDP2O95551 AC099791.1-201ENST00000416440 715 ntBASIC24.98■■□□□ 1.59
TDP2O95551 AC142381.2-201ENST00000566120 298 ntBASIC24.98■■□□□ 1.59
TDP2O95551 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.98■■□□□ 1.59
TDP2O95551 AC233992.3-201ENST00000607491 485 ntBASIC24.98■■□□□ 1.59
TDP2O95551 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TDP2O95551 C1orf229-201ENST00000623686 2258 ntBASIC24.98■■□□□ 1.59
TDP2O95551 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.98■■□□□ 1.59
TDP2O95551 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
TDP2O95551 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TDP2O95551 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TDP2O95551 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
TDP2O95551 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.97■■□□□ 1.59
TDP2O95551 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.97■■□□□ 1.59
TDP2O95551 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.96■■□□□ 1.59
TDP2O95551 AC027682.1-201ENST00000562846 899 ntBASIC24.96■■□□□ 1.59
TDP2O95551 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TDP2O95551 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.96■■□□□ 1.59
TDP2O95551 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
TDP2O95551 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.96■■□□□ 1.59
TDP2O95551 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
TDP2O95551 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms