Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
LTN1O94822 LINC00543-201ENST00000567234 1845 ntBASIC29.73■■■□□ 2.35
LTN1O94822 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
LTN1O94822 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
LTN1O94822 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
LTN1O94822 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
LTN1O94822 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
LTN1O94822 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC29.72■■■□□ 2.35
LTN1O94822 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
LTN1O94822 RARA-203ENST00000394086 2008 ntTSL 2 BASIC29.72■■■□□ 2.35
LTN1O94822 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
LTN1O94822 AC006015.1-201ENST00000429970 570 ntBASIC29.72■■■□□ 2.35
LTN1O94822 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC29.72■■■□□ 2.35
LTN1O94822 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC29.72■■■□□ 2.35
LTN1O94822 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC29.71■■■□□ 2.35
LTN1O94822 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
LTN1O94822 LINC02228-203ENST00000641970 1355 ntBASIC29.71■■■□□ 2.35
LTN1O94822 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC29.71■■■□□ 2.35
LTN1O94822 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
LTN1O94822 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC29.71■■■□□ 2.35
LTN1O94822 AC137761.2-201ENST00000561729 223 ntBASIC29.71■■■□□ 2.35
LTN1O94822 AC145350.3-201ENST00000569033 163 ntBASIC29.71■■■□□ 2.35
LTN1O94822 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
LTN1O94822 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC29.7■■■□□ 2.35
LTN1O94822 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC29.7■■■□□ 2.34
LTN1O94822 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC29.69■■■□□ 2.34
LTN1O94822 AC073111.5-205ENST00000641717 521 ntBASIC29.69■■■□□ 2.34
LTN1O94822 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
LTN1O94822 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
LTN1O94822 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
LTN1O94822 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
LTN1O94822 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
LTN1O94822 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
LTN1O94822 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
LTN1O94822 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC29.69■■■□□ 2.34
LTN1O94822 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC29.69■■■□□ 2.34
LTN1O94822 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
LTN1O94822 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
LTN1O94822 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
LTN1O94822 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
LTN1O94822 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
LTN1O94822 H19-210ENST00000439725 1929 ntTSL 2 BASIC29.68■■■□□ 2.34
LTN1O94822 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
LTN1O94822 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC29.68■■■□□ 2.34
LTN1O94822 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC29.68■■■□□ 2.34
LTN1O94822 DBI-210ENST00000542275 757 ntTSL 5 BASIC29.68■■■□□ 2.34
LTN1O94822 GALNS-213ENST00000569433 723 ntTSL 3 BASIC29.68■■■□□ 2.34
LTN1O94822 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
LTN1O94822 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
LTN1O94822 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC29.68■■■□□ 2.34
LTN1O94822 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
LTN1O94822 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC29.68■■■□□ 2.34
LTN1O94822 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
LTN1O94822 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC29.67■■■□□ 2.34
LTN1O94822 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC29.67■■■□□ 2.34
LTN1O94822 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC29.67■■■□□ 2.34
LTN1O94822 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC29.67■■■□□ 2.34
LTN1O94822 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC29.67■■■□□ 2.34
LTN1O94822 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
LTN1O94822 HLA-L-209ENST00000420110 1011 ntBASIC29.67■■■□□ 2.34
LTN1O94822 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC29.67■■■□□ 2.34
LTN1O94822 AC004854.2-201ENST00000608450 1441 ntBASIC29.66■■■□□ 2.34
LTN1O94822 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
LTN1O94822 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
LTN1O94822 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC29.66■■■□□ 2.34
LTN1O94822 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC29.65■■■□□ 2.34
LTN1O94822 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC29.65■■■□□ 2.34
LTN1O94822 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC29.65■■■□□ 2.34
LTN1O94822 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC29.65■■■□□ 2.34
LTN1O94822 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC29.65■■■□□ 2.34
LTN1O94822 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
LTN1O94822 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
LTN1O94822 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
LTN1O94822 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
LTN1O94822 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC29.65■■■□□ 2.34
LTN1O94822 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
LTN1O94822 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC29.64■■■□□ 2.34
LTN1O94822 WWOX-218ENST00000627394 894 ntTSL 5 BASIC29.64■■■□□ 2.34
LTN1O94822 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC29.64■■■□□ 2.34
LTN1O94822 AP004607.4-201ENST00000530158 1459 ntBASIC29.64■■■□□ 2.34
LTN1O94822 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
LTN1O94822 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC29.64■■■□□ 2.34
LTN1O94822 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC29.64■■■□□ 2.34
LTN1O94822 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
LTN1O94822 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC29.63■■■□□ 2.33
LTN1O94822 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
LTN1O94822 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC29.63■■■□□ 2.33
LTN1O94822 AC087239.1-201ENST00000622671 572 ntBASIC29.63■■■□□ 2.33
LTN1O94822 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC29.63■■■□□ 2.33
LTN1O94822 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
LTN1O94822 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
LTN1O94822 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC29.62■■■□□ 2.33
LTN1O94822 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC29.62■■■□□ 2.33
LTN1O94822 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
LTN1O94822 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
LTN1O94822 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC29.62■■■□□ 2.33
LTN1O94822 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
LTN1O94822 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC29.62■■■□□ 2.33
LTN1O94822 EI24-211ENST00000534546 1544 ntTSL 2 BASIC29.62■■■□□ 2.33
LTN1O94822 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms