Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22■■□□□ 1.11
GPC4O75487 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
GPC4O75487 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
GPC4O75487 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22■■□□□ 1.11
GPC4O75487 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22■■□□□ 1.11
GPC4O75487 SRR-208ENST00000576848 588 ntTSL 4 BASIC22■■□□□ 1.11
GPC4O75487 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
GPC4O75487 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
GPC4O75487 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
GPC4O75487 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
GPC4O75487 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
GPC4O75487 EP400NL-214ENST00000641289 2402 ntBASIC21.99■■□□□ 1.11
GPC4O75487 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
GPC4O75487 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
GPC4O75487 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.99■■□□□ 1.11
GPC4O75487 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
GPC4O75487 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.99■■□□□ 1.11
GPC4O75487 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.99■■□□□ 1.11
GPC4O75487 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.99■■□□□ 1.11
GPC4O75487 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.99■■□□□ 1.11
GPC4O75487 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
GPC4O75487 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
GPC4O75487 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
GPC4O75487 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
GPC4O75487 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
GPC4O75487 CLDN5-201ENST00000403084 2357 ntBASIC21.98■■□□□ 1.11
GPC4O75487 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
GPC4O75487 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
GPC4O75487 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
GPC4O75487 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.98■■□□□ 1.11
GPC4O75487 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
GPC4O75487 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
GPC4O75487 FP325331.1-202ENST00000623531 1380 ntBASIC21.98■■□□□ 1.11
GPC4O75487 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.97■■□□□ 1.11
GPC4O75487 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.97■■□□□ 1.11
GPC4O75487 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
GPC4O75487 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
GPC4O75487 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
GPC4O75487 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
GPC4O75487 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.97■■□□□ 1.11
GPC4O75487 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
GPC4O75487 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
GPC4O75487 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.97■■□□□ 1.11
GPC4O75487 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.97■■□□□ 1.11
GPC4O75487 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
GPC4O75487 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.96■■□□□ 1.11
GPC4O75487 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
GPC4O75487 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GPC4O75487 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
GPC4O75487 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.96■■□□□ 1.11
GPC4O75487 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.96■■□□□ 1.11
GPC4O75487 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
GPC4O75487 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
GPC4O75487 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
GPC4O75487 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.96■■□□□ 1.11
GPC4O75487 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
GPC4O75487 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GPC4O75487 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
GPC4O75487 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
GPC4O75487 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
GPC4O75487 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.95■■□□□ 1.1
GPC4O75487 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
GPC4O75487 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
GPC4O75487 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GPC4O75487 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
GPC4O75487 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.95■■□□□ 1.1
GPC4O75487 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.95■■□□□ 1.1
GPC4O75487 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.95■■□□□ 1.1
GPC4O75487 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GPC4O75487 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
GPC4O75487 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
GPC4O75487 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GPC4O75487 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.94■■□□□ 1.1
GPC4O75487 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.94■■□□□ 1.1
GPC4O75487 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
GPC4O75487 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.94■■□□□ 1.1
GPC4O75487 MIR4466-201ENST00000606121 54 ntBASIC21.94■■□□□ 1.1
GPC4O75487 AC131212.1-201ENST00000613771 668 ntBASIC21.94■■□□□ 1.1
GPC4O75487 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.94■■□□□ 1.1
GPC4O75487 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
GPC4O75487 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
GPC4O75487 AL353803.4-201ENST00000565882 1934 ntBASIC21.94■■□□□ 1.1
GPC4O75487 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GPC4O75487 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
GPC4O75487 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
GPC4O75487 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
GPC4O75487 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
GPC4O75487 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
GPC4O75487 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.93■■□□□ 1.1
GPC4O75487 AC131281.2-201ENST00000520478 145 ntBASIC21.93■■□□□ 1.1
GPC4O75487 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.93■■□□□ 1.1
GPC4O75487 LINC01529-204ENST00000636474 1715 ntBASIC21.93■■□□□ 1.1
GPC4O75487 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GPC4O75487 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.92■■□□□ 1.1
GPC4O75487 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GPC4O75487 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.92■■□□□ 1.1
GPC4O75487 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GPC4O75487 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GPC4O75487 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
GPC4O75487 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 156.6 ms