Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC10.03□□□□□ -0.8
USH2AO75445 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
USH2AO75445 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.8
USH2AO75445 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
USH2AO75445 GXYLT1P3-201ENST00000453058 1193 ntBASIC10.02□□□□□ -0.8
USH2AO75445 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
USH2AO75445 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC10.02□□□□□ -0.8
USH2AO75445 ERN1-208ENST00000606895 2068 ntBASIC10.02□□□□□ -0.8
USH2AO75445 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC10.02□□□□□ -0.8
USH2AO75445 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
USH2AO75445 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
USH2AO75445 STK32C-205ENST00000456004 607 ntTSL 2 BASIC10.02□□□□□ -0.81
USH2AO75445 RHOD-202ENST00000532559 538 ntTSL 3 BASIC10.02□□□□□ -0.81
USH2AO75445 RARA-203ENST00000394086 2008 ntTSL 2 BASIC10.02□□□□□ -0.81
USH2AO75445 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC10.02□□□□□ -0.81
USH2AO75445 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC10.02□□□□□ -0.81
USH2AO75445 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC10.02□□□□□ -0.81
USH2AO75445 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC10.02□□□□□ -0.81
USH2AO75445 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC10.02□□□□□ -0.81
USH2AO75445 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
USH2AO75445 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
USH2AO75445 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
USH2AO75445 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
USH2AO75445 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
USH2AO75445 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
USH2AO75445 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
USH2AO75445 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
USH2AO75445 RCN1P1-201ENST00000400413 996 ntBASIC10.02□□□□□ -0.81
USH2AO75445 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC10.02□□□□□ -0.81
USH2AO75445 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC10.02□□□□□ -0.81
USH2AO75445 MMD2-204ENST00000612910 778 ntTSL 5 BASIC10.02□□□□□ -0.81
USH2AO75445 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
USH2AO75445 AC133041.1-202ENST00000642053 222 ntBASIC10.02□□□□□ -0.81
USH2AO75445 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
USH2AO75445 UNC93B5-201ENST00000530315 699 ntBASIC10.01□□□□□ -0.81
USH2AO75445 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC10.01□□□□□ -0.81
USH2AO75445 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC10.01□□□□□ -0.81
USH2AO75445 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
USH2AO75445 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
USH2AO75445 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
USH2AO75445 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC10.01□□□□□ -0.81
USH2AO75445 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
USH2AO75445 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
USH2AO75445 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
USH2AO75445 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
USH2AO75445 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
USH2AO75445 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC10.01□□□□□ -0.81
USH2AO75445 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
USH2AO75445 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
USH2AO75445 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
USH2AO75445 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC10□□□□□ -0.81
USH2AO75445 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC10□□□□□ -0.81
USH2AO75445 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
USH2AO75445 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
USH2AO75445 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC10□□□□□ -0.81
USH2AO75445 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC10□□□□□ -0.81
USH2AO75445 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
USH2AO75445 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC10□□□□□ -0.81
USH2AO75445 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
USH2AO75445 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
USH2AO75445 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC10□□□□□ -0.81
USH2AO75445 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
USH2AO75445 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC10□□□□□ -0.81
USH2AO75445 MFF-208ENST00000409616 1247 ntTSL 5 BASIC10□□□□□ -0.81
USH2AO75445 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
USH2AO75445 AC142381.4-202ENST00000563973 229 ntBASIC10□□□□□ -0.81
USH2AO75445 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
USH2AO75445 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC10□□□□□ -0.81
USH2AO75445 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC10□□□□□ -0.81
USH2AO75445 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC10□□□□□ -0.81
USH2AO75445 BET1L-207ENST00000529614 560 ntTSL 5 BASIC10□□□□□ -0.81
USH2AO75445 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC10□□□□□ -0.81
USH2AO75445 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC10□□□□□ -0.81
USH2AO75445 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
USH2AO75445 AC097639.1-201ENST00000565519 1891 ntBASIC10□□□□□ -0.81
USH2AO75445 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC10□□□□□ -0.81
USH2AO75445 PPP1R14BP2-201ENST00000426284 444 ntBASIC10□□□□□ -0.81
USH2AO75445 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC10□□□□□ -0.81
USH2AO75445 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC10□□□□□ -0.81
USH2AO75445 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
USH2AO75445 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
USH2AO75445 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
USH2AO75445 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
USH2AO75445 BRI3-207ENST00000539286 699 ntTSL 2 BASIC9.99□□□□□ -0.81
USH2AO75445 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
USH2AO75445 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC9.99□□□□□ -0.81
USH2AO75445 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
USH2AO75445 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
USH2AO75445 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC9.99□□□□□ -0.81
USH2AO75445 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
USH2AO75445 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
USH2AO75445 RNF146-206ENST00000480444 843 ntTSL 2 BASIC9.99□□□□□ -0.81
USH2AO75445 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC9.99□□□□□ -0.81
USH2AO75445 Z99916.2-201ENST00000604037 246 ntBASIC9.99□□□□□ -0.81
USH2AO75445 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC9.99□□□□□ -0.81
USH2AO75445 PKM-203ENST00000389093 2279 ntTSL 5 BASIC9.99□□□□□ -0.81
USH2AO75445 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
USH2AO75445 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
USH2AO75445 AC093787.1-201ENST00000450396 207 ntBASIC9.99□□□□□ -0.81
USH2AO75445 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC9.99□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms