Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.94■□□□□ 0.78
ZIC3O60481 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZIC3O60481 ZNRF2P3-201ENST00000424200 374 ntBASIC19.94■□□□□ 0.78
ZIC3O60481 AC105265.2-201ENST00000467189 838 ntBASIC19.94■□□□□ 0.78
ZIC3O60481 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.94■□□□□ 0.78
ZIC3O60481 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
ZIC3O60481 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZIC3O60481 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZIC3O60481 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZIC3O60481 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
ZIC3O60481 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ZIC3O60481 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.93■□□□□ 0.78
ZIC3O60481 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZIC3O60481 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.93■□□□□ 0.78
ZIC3O60481 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZIC3O60481 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZIC3O60481 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.93■□□□□ 0.78
ZIC3O60481 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.93■□□□□ 0.78
ZIC3O60481 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZIC3O60481 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.93■□□□□ 0.78
ZIC3O60481 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZIC3O60481 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.93■□□□□ 0.78
ZIC3O60481 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZIC3O60481 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.93■□□□□ 0.78
ZIC3O60481 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZIC3O60481 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
ZIC3O60481 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZIC3O60481 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
ZIC3O60481 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZIC3O60481 AP005435.1-201ENST00000529293 1178 ntBASIC19.92■□□□□ 0.78
ZIC3O60481 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
ZIC3O60481 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.92■□□□□ 0.78
ZIC3O60481 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ZIC3O60481 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZIC3O60481 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZIC3O60481 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZIC3O60481 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
ZIC3O60481 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ZIC3O60481 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.91■□□□□ 0.78
ZIC3O60481 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.91■□□□□ 0.78
ZIC3O60481 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.91■□□□□ 0.78
ZIC3O60481 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZIC3O60481 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.91■□□□□ 0.78
ZIC3O60481 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
ZIC3O60481 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZIC3O60481 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZIC3O60481 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
ZIC3O60481 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZIC3O60481 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.9■□□□□ 0.78
ZIC3O60481 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ZIC3O60481 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.9■□□□□ 0.78
ZIC3O60481 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZIC3O60481 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.9■□□□□ 0.78
ZIC3O60481 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.9■□□□□ 0.78
ZIC3O60481 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZIC3O60481 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.9■□□□□ 0.78
ZIC3O60481 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
ZIC3O60481 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZIC3O60481 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZIC3O60481 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
ZIC3O60481 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.9■□□□□ 0.78
ZIC3O60481 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ZIC3O60481 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZIC3O60481 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ZIC3O60481 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.89■□□□□ 0.77
ZIC3O60481 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ZIC3O60481 AL031602.1-201ENST00000633169 911 ntBASIC19.89■□□□□ 0.77
ZIC3O60481 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZIC3O60481 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.88■□□□□ 0.77
ZIC3O60481 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.88■□□□□ 0.77
ZIC3O60481 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZIC3O60481 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.88■□□□□ 0.77
ZIC3O60481 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.88■□□□□ 0.77
ZIC3O60481 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.88■□□□□ 0.77
ZIC3O60481 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.88■□□□□ 0.77
ZIC3O60481 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZIC3O60481 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.88■□□□□ 0.77
ZIC3O60481 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ZIC3O60481 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZIC3O60481 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.88■□□□□ 0.77
ZIC3O60481 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZIC3O60481 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.87■□□□□ 0.77
ZIC3O60481 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZIC3O60481 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ZIC3O60481 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.87■□□□□ 0.77
ZIC3O60481 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZIC3O60481 TSPY26P-201ENST00000476365 1326 ntBASIC19.87■□□□□ 0.77
ZIC3O60481 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
ZIC3O60481 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.87■□□□□ 0.77
ZIC3O60481 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZIC3O60481 IGHV3-19-201ENST00000521488 291 ntBASIC19.87■□□□□ 0.77
ZIC3O60481 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.87■□□□□ 0.77
ZIC3O60481 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
ZIC3O60481 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZIC3O60481 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZIC3O60481 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZIC3O60481 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZIC3O60481 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.86■□□□□ 0.77
ZIC3O60481 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.86■□□□□ 0.77
ZIC3O60481 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms