Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF3IP2O43734 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF3IP2O43734 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAF3IP2O43734 AL136116.3-201ENST00000402907 1138 ntBASIC19.67■□□□□ 0.74
TRAF3IP2O43734 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.67■□□□□ 0.74
TRAF3IP2O43734 MIR3181-201ENST00000578512 73 ntBASIC19.67■□□□□ 0.74
TRAF3IP2O43734 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.67■□□□□ 0.74
TRAF3IP2O43734 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP2O43734 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP2O43734 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TRAF3IP2O43734 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP2O43734 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRAF3IP2O43734 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP2O43734 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP2O43734 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TRAF3IP2O43734 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP2O43734 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRAF3IP2O43734 AC133637.1-201ENST00000624115 1537 ntBASIC19.66■□□□□ 0.74
TRAF3IP2O43734 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF3IP2O43734 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
TRAF3IP2O43734 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF3IP2O43734 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF3IP2O43734 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF3IP2O43734 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF3IP2O43734 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF3IP2O43734 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF3IP2O43734 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.65■□□□□ 0.74
TRAF3IP2O43734 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.65■□□□□ 0.74
TRAF3IP2O43734 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.65■□□□□ 0.74
TRAF3IP2O43734 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TRAF3IP2O43734 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF3IP2O43734 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF3IP2O43734 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF3IP2O43734 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF3IP2O43734 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF3IP2O43734 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRAF3IP2O43734 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRAF3IP2O43734 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRAF3IP2O43734 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRAF3IP2O43734 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
TRAF3IP2O43734 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.64■□□□□ 0.74
TRAF3IP2O43734 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TRAF3IP2O43734 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.64■□□□□ 0.73
TRAF3IP2O43734 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TRAF3IP2O43734 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF3IP2O43734 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF3IP2O43734 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF3IP2O43734 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.64■□□□□ 0.73
TRAF3IP2O43734 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.64■□□□□ 0.73
TRAF3IP2O43734 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF3IP2O43734 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF3IP2O43734 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF3IP2O43734 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF3IP2O43734 AC233723.2-201ENST00000623798 2106 ntBASIC19.63■□□□□ 0.73
TRAF3IP2O43734 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAF3IP2O43734 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF3IP2O43734 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF3IP2O43734 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF3IP2O43734 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF3IP2O43734 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TRAF3IP2O43734 SERBP1P1-201ENST00000396021 1160 ntBASIC19.63■□□□□ 0.73
TRAF3IP2O43734 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
TRAF3IP2O43734 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF3IP2O43734 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP2O43734 ESRRAP2-201ENST00000418437 1549 ntBASIC19.62■□□□□ 0.73
TRAF3IP2O43734 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TRAF3IP2O43734 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP2O43734 DUX4L19-201ENST00000557448 1267 ntBASIC19.62■□□□□ 0.73
TRAF3IP2O43734 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.62■□□□□ 0.73
TRAF3IP2O43734 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP2O43734 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP2O43734 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TRAF3IP2O43734 AC087742.1-201ENST00000575880 1738 ntBASIC19.62■□□□□ 0.73
TRAF3IP2O43734 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF3IP2O43734 SYT6-210ENST00000641643 1587 ntBASIC19.61■□□□□ 0.73
TRAF3IP2O43734 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF3IP2O43734 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TRAF3IP2O43734 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF3IP2O43734 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.61■□□□□ 0.73
TRAF3IP2O43734 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF3IP2O43734 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF3IP2O43734 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF3IP2O43734 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF3IP2O43734 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF3IP2O43734 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF3IP2O43734 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF3IP2O43734 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAF3IP2O43734 AL138724.1-201ENST00000606771 1088 ntBASIC19.61■□□□□ 0.73
TRAF3IP2O43734 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.61■□□□□ 0.73
TRAF3IP2O43734 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.61■□□□□ 0.73
TRAF3IP2O43734 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF3IP2O43734 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF3IP2O43734 LINC01960-201ENST00000563759 1884 ntBASIC19.6■□□□□ 0.73
TRAF3IP2O43734 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF3IP2O43734 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF3IP2O43734 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAF3IP2O43734 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAF3IP2O43734 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAF3IP2O43734 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAF3IP2O43734 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms