Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SGCEO43556 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SGCEO43556 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SGCEO43556 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SGCEO43556 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.39■□□□□ 0.69
SGCEO43556 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SGCEO43556 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.39■□□□□ 0.69
SGCEO43556 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SGCEO43556 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.39■□□□□ 0.69
SGCEO43556 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.39■□□□□ 0.69
SGCEO43556 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SGCEO43556 AC241377.3-202ENST00000626088 1088 ntBASIC19.39■□□□□ 0.69
SGCEO43556 AC241585.3-202ENST00000628937 1088 ntBASIC19.39■□□□□ 0.69
SGCEO43556 AC245100.8-202ENST00000629247 1058 ntBASIC19.39■□□□□ 0.69
SGCEO43556 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SGCEO43556 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SGCEO43556 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SGCEO43556 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.39■□□□□ 0.69
SGCEO43556 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SGCEO43556 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
SGCEO43556 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SGCEO43556 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.39■□□□□ 0.69
SGCEO43556 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SGCEO43556 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.38■□□□□ 0.69
SGCEO43556 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.38■□□□□ 0.69
SGCEO43556 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.38■□□□□ 0.69
SGCEO43556 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SGCEO43556 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.38■□□□□ 0.69
SGCEO43556 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.38■□□□□ 0.69
SGCEO43556 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.38■□□□□ 0.69
SGCEO43556 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SGCEO43556 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.38■□□□□ 0.69
SGCEO43556 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SGCEO43556 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SGCEO43556 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SGCEO43556 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SGCEO43556 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
SGCEO43556 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SGCEO43556 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.37■□□□□ 0.69
SGCEO43556 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SGCEO43556 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.37■□□□□ 0.69
SGCEO43556 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.37■□□□□ 0.69
SGCEO43556 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.37■□□□□ 0.69
SGCEO43556 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.37■□□□□ 0.69
SGCEO43556 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SGCEO43556 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SGCEO43556 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SGCEO43556 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SGCEO43556 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SGCEO43556 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.36■□□□□ 0.69
SGCEO43556 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SGCEO43556 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SGCEO43556 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SGCEO43556 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SGCEO43556 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.36■□□□□ 0.69
SGCEO43556 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SGCEO43556 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.36■□□□□ 0.69
SGCEO43556 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.36■□□□□ 0.69
SGCEO43556 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SGCEO43556 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.36■□□□□ 0.69
SGCEO43556 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SGCEO43556 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SGCEO43556 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.36■□□□□ 0.69
SGCEO43556 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.35■□□□□ 0.69
SGCEO43556 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SGCEO43556 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SGCEO43556 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SGCEO43556 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.35■□□□□ 0.69
SGCEO43556 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.35■□□□□ 0.69
SGCEO43556 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.35■□□□□ 0.69
SGCEO43556 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.35■□□□□ 0.69
SGCEO43556 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.35■□□□□ 0.69
SGCEO43556 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.35■□□□□ 0.69
SGCEO43556 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.35■□□□□ 0.69
SGCEO43556 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.35■□□□□ 0.69
SGCEO43556 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
SGCEO43556 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SGCEO43556 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SGCEO43556 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SGCEO43556 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SGCEO43556 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SGCEO43556 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.34■□□□□ 0.69
SGCEO43556 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SGCEO43556 AC233723.2-201ENST00000623798 2106 ntBASIC19.34■□□□□ 0.69
SGCEO43556 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SGCEO43556 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SGCEO43556 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SGCEO43556 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.34■□□□□ 0.69
SGCEO43556 SRD5A1P1-201ENST00000442297 786 ntBASIC19.34■□□□□ 0.69
SGCEO43556 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.34■□□□□ 0.69
SGCEO43556 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SGCEO43556 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SGCEO43556 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SGCEO43556 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SGCEO43556 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SGCEO43556 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SGCEO43556 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SGCEO43556 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SGCEO43556 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.34■□□□□ 0.69
SGCEO43556 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms