Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTL8CO15255 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTL8CO15255 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC14.78□□□□□ -0.04
RTL8CO15255 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTL8CO15255 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RTL8CO15255 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RTL8CO15255 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
RTL8CO15255 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RTL8CO15255 SHF-207ENST00000560540 2062 ntTSL 5 BASIC14.77□□□□□ -0.04
RTL8CO15255 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RTL8CO15255 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.77□□□□□ -0.05
RTL8CO15255 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.77□□□□□ -0.05
RTL8CO15255 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RTL8CO15255 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.77□□□□□ -0.05
RTL8CO15255 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.77□□□□□ -0.05
RTL8CO15255 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RTL8CO15255 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RTL8CO15255 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RTL8CO15255 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RTL8CO15255 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RTL8CO15255 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RTL8CO15255 STX4-202ENST00000394998 1498 ntTSL 2 BASIC14.76□□□□□ -0.05
RTL8CO15255 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTL8CO15255 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RTL8CO15255 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTL8CO15255 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTL8CO15255 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTL8CO15255 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTL8CO15255 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RTL8CO15255 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.76□□□□□ -0.05
RTL8CO15255 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.76□□□□□ -0.05
RTL8CO15255 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.76□□□□□ -0.05
RTL8CO15255 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTL8CO15255 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RTL8CO15255 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.76□□□□□ -0.05
RTL8CO15255 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTL8CO15255 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTL8CO15255 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RTL8CO15255 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
RTL8CO15255 RARA-203ENST00000394086 2008 ntTSL 2 BASIC14.75□□□□□ -0.05
RTL8CO15255 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RTL8CO15255 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RTL8CO15255 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
RTL8CO15255 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RTL8CO15255 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RTL8CO15255 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RTL8CO15255 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RTL8CO15255 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RTL8CO15255 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RTL8CO15255 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC14.75□□□□□ -0.05
RTL8CO15255 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RTL8CO15255 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC14.75□□□□□ -0.05
RTL8CO15255 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RTL8CO15255 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RTL8CO15255 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC14.74□□□□□ -0.05
RTL8CO15255 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RTL8CO15255 TMEM202-AS1-202ENST00000565181 2325 ntBASIC14.74□□□□□ -0.05
RTL8CO15255 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.74□□□□□ -0.05
RTL8CO15255 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RTL8CO15255 NCF1B-203ENST00000435988 1254 ntBASIC14.74□□□□□ -0.05
RTL8CO15255 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RTL8CO15255 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RTL8CO15255 TMEM191A-211ENST00000637163 1067 ntBASIC14.74□□□□□ -0.05
RTL8CO15255 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RTL8CO15255 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RTL8CO15255 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RTL8CO15255 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RTL8CO15255 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RTL8CO15255 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RTL8CO15255 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RTL8CO15255 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RTL8CO15255 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RTL8CO15255 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RTL8CO15255 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RTL8CO15255 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.73□□□□□ -0.05
RTL8CO15255 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.73□□□□□ -0.05
RTL8CO15255 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RTL8CO15255 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RTL8CO15255 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RTL8CO15255 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RTL8CO15255 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RTL8CO15255 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RTL8CO15255 LINC01529-204ENST00000636474 1715 ntBASIC14.72□□□□□ -0.05
RTL8CO15255 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.72□□□□□ -0.05
RTL8CO15255 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC14.72□□□□□ -0.05
RTL8CO15255 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.72□□□□□ -0.05
RTL8CO15255 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC14.72□□□□□ -0.05
RTL8CO15255 AC142381.3-201ENST00000568208 1670 ntBASIC14.72□□□□□ -0.05
RTL8CO15255 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RTL8CO15255 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RTL8CO15255 KRT19P1-201ENST00000405746 1186 ntBASIC14.72□□□□□ -0.05
RTL8CO15255 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.72□□□□□ -0.05
RTL8CO15255 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RTL8CO15255 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RTL8CO15255 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC14.72□□□□□ -0.05
RTL8CO15255 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RTL8CO15255 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
RTL8CO15255 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RTL8CO15255 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RTL8CO15255 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms