Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC26.77■■□□□ 1.88
SEMA3EO15041 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC26.77■■□□□ 1.88
SEMA3EO15041 MIR6084-201ENST00000622012 110 ntBASIC26.77■■□□□ 1.88
SEMA3EO15041 AC093323.1-202ENST00000635031 2045 ntBASIC26.77■■□□□ 1.88
SEMA3EO15041 ANOS2P-203ENST00000472227 1816 ntBASIC26.76■■□□□ 1.88
SEMA3EO15041 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.76■■□□□ 1.88
SEMA3EO15041 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.76■■□□□ 1.87
SEMA3EO15041 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SEMA3EO15041 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SEMA3EO15041 PARL-206ENST00000435888 1098 ntTSL 5 BASIC26.76■■□□□ 1.87
SEMA3EO15041 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC26.76■■□□□ 1.87
SEMA3EO15041 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
SEMA3EO15041 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.76■■□□□ 1.87
SEMA3EO15041 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SEMA3EO15041 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SEMA3EO15041 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.75■■□□□ 1.87
SEMA3EO15041 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.75■■□□□ 1.87
SEMA3EO15041 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
SEMA3EO15041 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SEMA3EO15041 AC105233.4-201ENST00000642045 216 ntBASIC26.75■■□□□ 1.87
SEMA3EO15041 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SEMA3EO15041 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SEMA3EO15041 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
SEMA3EO15041 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
SEMA3EO15041 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.74■■□□□ 1.87
SEMA3EO15041 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SEMA3EO15041 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.74■■□□□ 1.87
SEMA3EO15041 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.74■■□□□ 1.87
SEMA3EO15041 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
SEMA3EO15041 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.74■■□□□ 1.87
SEMA3EO15041 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.74■■□□□ 1.87
SEMA3EO15041 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
SEMA3EO15041 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.74■■□□□ 1.87
SEMA3EO15041 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.74■■□□□ 1.87
SEMA3EO15041 EI24-211ENST00000534546 1544 ntTSL 2 BASIC26.74■■□□□ 1.87
SEMA3EO15041 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.74■■□□□ 1.87
SEMA3EO15041 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SEMA3EO15041 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SEMA3EO15041 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
SEMA3EO15041 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.73■■□□□ 1.87
SEMA3EO15041 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
SEMA3EO15041 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SEMA3EO15041 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC26.73■■□□□ 1.87
SEMA3EO15041 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
SEMA3EO15041 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.73■■□□□ 1.87
SEMA3EO15041 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC26.73■■□□□ 1.87
SEMA3EO15041 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SEMA3EO15041 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
SEMA3EO15041 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SEMA3EO15041 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.73■■□□□ 1.87
SEMA3EO15041 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
SEMA3EO15041 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SEMA3EO15041 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SEMA3EO15041 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SEMA3EO15041 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SEMA3EO15041 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.72■■□□□ 1.87
SEMA3EO15041 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC26.72■■□□□ 1.87
SEMA3EO15041 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC26.72■■□□□ 1.87
SEMA3EO15041 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SEMA3EO15041 AC087239.1-201ENST00000622671 572 ntBASIC26.72■■□□□ 1.87
SEMA3EO15041 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SEMA3EO15041 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SEMA3EO15041 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
SEMA3EO15041 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC26.71■■□□□ 1.87
SEMA3EO15041 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SEMA3EO15041 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.71■■□□□ 1.87
SEMA3EO15041 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SEMA3EO15041 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SEMA3EO15041 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SEMA3EO15041 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
SEMA3EO15041 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.71■■□□□ 1.87
SEMA3EO15041 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.71■■□□□ 1.87
SEMA3EO15041 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.71■■□□□ 1.87
SEMA3EO15041 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.71■■□□□ 1.87
SEMA3EO15041 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.71■■□□□ 1.87
SEMA3EO15041 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SEMA3EO15041 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.71■■□□□ 1.87
SEMA3EO15041 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.7■■□□□ 1.87
SEMA3EO15041 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SEMA3EO15041 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SEMA3EO15041 HACD1-201ENST00000326961 773 ntTSL 2 BASIC26.7■■□□□ 1.86
SEMA3EO15041 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.7■■□□□ 1.86
SEMA3EO15041 AC010141.3-201ENST00000456659 717 ntBASIC26.7■■□□□ 1.86
SEMA3EO15041 DUX4L2-201ENST00000561772 1275 ntBASIC26.7■■□□□ 1.86
SEMA3EO15041 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC26.7■■□□□ 1.86
SEMA3EO15041 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC26.7■■□□□ 1.86
SEMA3EO15041 DUX4L6-201ENST00000626483 1275 ntBASIC26.7■■□□□ 1.86
SEMA3EO15041 DUX4L1-201ENST00000627662 1275 ntBASIC26.7■■□□□ 1.86
SEMA3EO15041 DUX4L8-201ENST00000629013 1275 ntBASIC26.7■■□□□ 1.86
SEMA3EO15041 DUX4L3-201ENST00000630187 1275 ntBASIC26.7■■□□□ 1.86
SEMA3EO15041 DUX4L7-201ENST00000630678 1275 ntBASIC26.7■■□□□ 1.86
SEMA3EO15041 DUX4L5-201ENST00000630834 1275 ntBASIC26.7■■□□□ 1.86
SEMA3EO15041 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
SEMA3EO15041 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.7■■□□□ 1.86
SEMA3EO15041 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.7■■□□□ 1.86
SEMA3EO15041 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
SEMA3EO15041 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
SEMA3EO15041 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC26.69■■□□□ 1.86
SEMA3EO15041 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
SEMA3EO15041 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms