Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH17O14917 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH17O14917 MIR4767-201ENST00000582827 78 ntBASIC21.01■□□□□ 0.95
PCDH17O14917 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PCDH17O14917 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.01■□□□□ 0.95
PCDH17O14917 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDH17O14917 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH17O14917 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH17O14917 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH17O14917 AC092068.2-201ENST00000590491 1708 ntBASIC21.01■□□□□ 0.95
PCDH17O14917 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21■□□□□ 0.95
PCDH17O14917 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21■□□□□ 0.95
PCDH17O14917 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH17O14917 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH17O14917 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21■□□□□ 0.95
PCDH17O14917 MIR939-201ENST00000401314 82 ntBASIC21■□□□□ 0.95
PCDH17O14917 AC027682.1-201ENST00000562846 899 ntBASIC21■□□□□ 0.95
PCDH17O14917 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PCDH17O14917 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDH17O14917 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH17O14917 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDH17O14917 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH17O14917 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH17O14917 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH17O14917 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH17O14917 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH17O14917 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PCDH17O14917 MIR3181-201ENST00000578512 73 ntBASIC20.99■□□□□ 0.95
PCDH17O14917 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PCDH17O14917 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDH17O14917 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.99■□□□□ 0.95
PCDH17O14917 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH17O14917 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH17O14917 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH17O14917 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH17O14917 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDH17O14917 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH17O14917 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH17O14917 C1orf229-201ENST00000623686 2258 ntBASIC20.98■□□□□ 0.95
PCDH17O14917 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH17O14917 ZNRF2P3-201ENST00000424200 374 ntBASIC20.98■□□□□ 0.95
PCDH17O14917 AP001330.3-201ENST00000520123 633 ntBASIC20.98■□□□□ 0.95
PCDH17O14917 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH17O14917 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH17O14917 AL136967.2-201ENST00000623968 743 ntBASIC20.98■□□□□ 0.95
PCDH17O14917 EP400NL-214ENST00000641289 2402 ntBASIC20.98■□□□□ 0.95
PCDH17O14917 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PCDH17O14917 RASA4CP-201ENST00000424092 1398 ntBASIC20.97■□□□□ 0.95
PCDH17O14917 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH17O14917 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH17O14917 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH17O14917 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH17O14917 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH17O14917 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH17O14917 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH17O14917 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH17O14917 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PCDH17O14917 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH17O14917 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH17O14917 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDH17O14917 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH17O14917 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
PCDH17O14917 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
PCDH17O14917 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH17O14917 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PCDH17O14917 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDH17O14917 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDH17O14917 AF213884.3-201ENST00000563833 479 ntBASIC20.96■□□□□ 0.95
PCDH17O14917 DUX4L4-201ENST00000566884 1269 ntBASIC20.96■□□□□ 0.95
PCDH17O14917 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH17O14917 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PCDH17O14917 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PCDH17O14917 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PCDH17O14917 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PCDH17O14917 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH17O14917 CLDN5-201ENST00000403084 2357 ntBASIC20.95■□□□□ 0.94
PCDH17O14917 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDH17O14917 BX842568.3-201ENST00000418104 571 ntBASIC20.95■□□□□ 0.94
PCDH17O14917 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDH17O14917 AC006455.2-201ENST00000429931 906 ntBASIC20.95■□□□□ 0.94
PCDH17O14917 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDH17O14917 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH17O14917 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH17O14917 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH17O14917 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH17O14917 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
PCDH17O14917 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH17O14917 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PCDH17O14917 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PCDH17O14917 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH17O14917 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH17O14917 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH17O14917 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH17O14917 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH17O14917 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH17O14917 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDH17O14917 pRNA.6-201ENST00000610482 90 ntBASIC20.94■□□□□ 0.94
PCDH17O14917 pRNA.5-201ENST00000612139 90 ntBASIC20.94■□□□□ 0.94
PCDH17O14917 pRNA.11-201ENST00000618423 90 ntBASIC20.94■□□□□ 0.94
PCDH17O14917 pRNA.13-201ENST00000619112 90 ntBASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms