Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.44
CHD1O14646 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC36.51■■■■□ 3.44
CHD1O14646 AC079140.4-201ENST00000507448 529 ntBASIC36.51■■■■□ 3.44
CHD1O14646 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC36.51■■■■□ 3.44
CHD1O14646 AC104187.1-201ENST00000607510 612 ntBASIC36.51■■■■□ 3.44
CHD1O14646 LSR-205ENST00000427250 1606 ntTSL 2 BASIC36.51■■■■□ 3.44
CHD1O14646 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.44
CHD1O14646 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC36.51■■■■□ 3.44
CHD1O14646 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.43
CHD1O14646 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC36.51■■■■□ 3.43
CHD1O14646 GCSHP5-201ENST00000443090 522 ntBASIC36.51■■■■□ 3.43
CHD1O14646 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC36.51■■■■□ 3.43
CHD1O14646 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC36.51■■■■□ 3.43
CHD1O14646 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC36.5■■■■□ 3.43
CHD1O14646 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC36.5■■■■□ 3.43
CHD1O14646 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC36.5■■■■□ 3.43
CHD1O14646 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC36.49■■■■□ 3.43
CHD1O14646 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC36.49■■■■□ 3.43
CHD1O14646 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC36.49■■■■□ 3.43
CHD1O14646 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC36.48■■■■□ 3.43
CHD1O14646 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC36.48■■■■□ 3.43
CHD1O14646 RARRES2P4-201ENST00000514074 484 ntBASIC36.48■■■■□ 3.43
CHD1O14646 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC36.48■■■■□ 3.43
CHD1O14646 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
CHD1O14646 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC36.48■■■■□ 3.43
CHD1O14646 PARP1-202ENST00000366792 553 ntTSL 3 BASIC36.48■■■■□ 3.43
CHD1O14646 MYCNOS-205ENST00000641950 531 ntBASIC36.48■■■■□ 3.43
CHD1O14646 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
CHD1O14646 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC36.47■■■■□ 3.43
CHD1O14646 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
CHD1O14646 AC142086.6-201ENST00000621154 1765 ntBASIC36.46■■■■□ 3.43
CHD1O14646 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC36.46■■■■□ 3.43
CHD1O14646 AL596275.1-201ENST00000423464 877 ntBASIC36.46■■■■□ 3.43
CHD1O14646 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC36.46■■■■□ 3.43
CHD1O14646 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC36.46■■■■□ 3.43
CHD1O14646 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC36.46■■■■□ 3.43
CHD1O14646 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC36.46■■■■□ 3.43
CHD1O14646 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
CHD1O14646 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
CHD1O14646 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
CHD1O14646 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
CHD1O14646 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC36.45■■■■□ 3.43
CHD1O14646 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC36.45■■■■□ 3.43
CHD1O14646 SMUG1P1-201ENST00000590640 811 ntBASIC36.45■■■■□ 3.43
CHD1O14646 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC36.45■■■■□ 3.43
CHD1O14646 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC36.45■■■■□ 3.43
CHD1O14646 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC36.45■■■■□ 3.43
CHD1O14646 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC36.45■■■■□ 3.43
CHD1O14646 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC36.45■■■■□ 3.42
CHD1O14646 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC36.44■■■■□ 3.42
CHD1O14646 DUSP5P2-201ENST00000426873 1033 ntBASIC36.44■■■■□ 3.42
CHD1O14646 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
CHD1O14646 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC36.44■■■■□ 3.42
CHD1O14646 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC36.44■■■■□ 3.42
CHD1O14646 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
CHD1O14646 UQCRFS1P1-201ENST00000435169 820 ntBASIC36.43■■■■□ 3.42
CHD1O14646 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
CHD1O14646 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC36.43■■■■□ 3.42
CHD1O14646 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC36.43■■■■□ 3.42
CHD1O14646 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC36.43■■■■□ 3.42
CHD1O14646 KRT87P-202ENST00000534226 1464 ntBASIC36.42■■■■□ 3.42
CHD1O14646 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC36.42■■■■□ 3.42
CHD1O14646 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC36.42■■■■□ 3.42
CHD1O14646 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC36.42■■■■□ 3.42
CHD1O14646 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC36.42■■■■□ 3.42
CHD1O14646 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC36.42■■■■□ 3.42
CHD1O14646 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC36.42■■■■□ 3.42
CHD1O14646 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC36.41■■■■□ 3.42
CHD1O14646 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
CHD1O14646 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
CHD1O14646 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC36.41■■■■□ 3.42
CHD1O14646 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
CHD1O14646 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC36.41■■■■□ 3.42
CHD1O14646 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC36.4■■■■□ 3.42
CHD1O14646 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC36.4■■■■□ 3.42
CHD1O14646 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC36.4■■■■□ 3.42
CHD1O14646 FP325331.1-202ENST00000623531 1380 ntBASIC36.4■■■■□ 3.42
CHD1O14646 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC36.4■■■■□ 3.42
CHD1O14646 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
CHD1O14646 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
CHD1O14646 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC36.39■■■■□ 3.42
CHD1O14646 AC133552.2-202ENST00000575694 574 ntBASIC36.39■■■■□ 3.42
CHD1O14646 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC36.39■■■■□ 3.42
CHD1O14646 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC36.39■■■■□ 3.42
CHD1O14646 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC36.39■■■■□ 3.42
CHD1O14646 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC36.39■■■■□ 3.42
CHD1O14646 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC36.39■■■■□ 3.42
CHD1O14646 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC36.39■■■■□ 3.42
CHD1O14646 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC36.38■■■■□ 3.41
CHD1O14646 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC36.38■■■■□ 3.41
CHD1O14646 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC36.38■■■■□ 3.41
CHD1O14646 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC36.38■■■■□ 3.41
CHD1O14646 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC36.38■■■■□ 3.41
CHD1O14646 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
CHD1O14646 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
CHD1O14646 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
CHD1O14646 ST7-205ENST00000393446 2114 ntTSL 5 BASIC36.38■■■■□ 3.41
CHD1O14646 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC36.37■■■■□ 3.41
CHD1O14646 APTR-203ENST00000430801 583 ntTSL 5 BASIC36.37■■■■□ 3.41
CHD1O14646 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC36.37■■■■□ 3.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms