Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC28.59■■■□□ 2.17
CHL1O00533 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
CHL1O00533 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC28.59■■■□□ 2.17
CHL1O00533 LGR4-203ENST00000480977 492 ntTSL 2 BASIC28.59■■■□□ 2.17
CHL1O00533 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC28.59■■■□□ 2.17
CHL1O00533 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
CHL1O00533 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CHL1O00533 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC28.59■■■□□ 2.17
CHL1O00533 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CHL1O00533 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
CHL1O00533 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC28.59■■■□□ 2.17
CHL1O00533 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
CHL1O00533 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CHL1O00533 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
CHL1O00533 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
CHL1O00533 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
CHL1O00533 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
CHL1O00533 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC28.58■■■□□ 2.17
CHL1O00533 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
CHL1O00533 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CHL1O00533 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CHL1O00533 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
CHL1O00533 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CHL1O00533 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC28.57■■■□□ 2.16
CHL1O00533 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC28.57■■■□□ 2.16
CHL1O00533 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC28.57■■■□□ 2.16
CHL1O00533 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC28.57■■■□□ 2.16
CHL1O00533 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC28.57■■■□□ 2.16
CHL1O00533 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CHL1O00533 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC28.57■■■□□ 2.16
CHL1O00533 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
CHL1O00533 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC28.56■■■□□ 2.16
CHL1O00533 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC28.56■■■□□ 2.16
CHL1O00533 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CHL1O00533 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
CHL1O00533 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC28.56■■■□□ 2.16
CHL1O00533 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC28.56■■■□□ 2.16
CHL1O00533 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CHL1O00533 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CHL1O00533 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CHL1O00533 NFE2L3P1-201ENST00000588207 1959 ntBASIC28.55■■■□□ 2.16
CHL1O00533 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC28.55■■■□□ 2.16
CHL1O00533 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CHL1O00533 EI24-211ENST00000534546 1544 ntTSL 2 BASIC28.55■■■□□ 2.16
CHL1O00533 AC026271.2-201ENST00000428091 497 ntBASIC28.55■■■□□ 2.16
CHL1O00533 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC28.55■■■□□ 2.16
CHL1O00533 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CHL1O00533 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
CHL1O00533 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC28.54■■■□□ 2.16
CHL1O00533 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CHL1O00533 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CHL1O00533 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CHL1O00533 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CHL1O00533 JTB-203ENST00000368589 1216 ntTSL 2 BASIC28.54■■■□□ 2.16
CHL1O00533 MIR572-201ENST00000384983 95 ntBASIC28.54■■■□□ 2.16
CHL1O00533 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CHL1O00533 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CHL1O00533 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CHL1O00533 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
CHL1O00533 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CHL1O00533 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC28.53■■■□□ 2.16
CHL1O00533 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CHL1O00533 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
CHL1O00533 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CHL1O00533 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC28.52■■■□□ 2.16
CHL1O00533 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CHL1O00533 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
CHL1O00533 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CHL1O00533 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC28.52■■■□□ 2.16
CHL1O00533 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CHL1O00533 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CHL1O00533 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CHL1O00533 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CHL1O00533 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC28.51■■■□□ 2.15
CHL1O00533 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
CHL1O00533 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC28.51■■■□□ 2.15
CHL1O00533 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CHL1O00533 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC28.5■■■□□ 2.15
CHL1O00533 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CHL1O00533 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC28.5■■■□□ 2.15
CHL1O00533 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
CHL1O00533 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC28.5■■■□□ 2.15
CHL1O00533 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC28.5■■■□□ 2.15
CHL1O00533 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
CHL1O00533 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
CHL1O00533 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC28.5■■■□□ 2.15
CHL1O00533 AC068587.7-201ENST00000641602 218 ntBASIC28.5■■■□□ 2.15
CHL1O00533 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CHL1O00533 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
CHL1O00533 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC28.49■■■□□ 2.15
CHL1O00533 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CHL1O00533 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CHL1O00533 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC28.49■■■□□ 2.15
CHL1O00533 RARRES2P6-201ENST00000567333 442 ntBASIC28.49■■■□□ 2.15
CHL1O00533 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CHL1O00533 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CHL1O00533 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CHL1O00533 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC28.48■■■□□ 2.15
CHL1O00533 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC28.48■■■□□ 2.15
CHL1O00533 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms