Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC30.07■■■□□ 2.4
PIK3C2AO00443 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC30.07■■■□□ 2.4
PIK3C2AO00443 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC30.07■■■□□ 2.4
PIK3C2AO00443 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
PIK3C2AO00443 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
PIK3C2AO00443 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
PIK3C2AO00443 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
PIK3C2AO00443 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
PIK3C2AO00443 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC30.06■■■□□ 2.4
PIK3C2AO00443 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC30.06■■■□□ 2.4
PIK3C2AO00443 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC30.06■■■□□ 2.4
PIK3C2AO00443 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC30.06■■■□□ 2.4
PIK3C2AO00443 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
PIK3C2AO00443 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
PIK3C2AO00443 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
PIK3C2AO00443 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC30.05■■■□□ 2.4
PIK3C2AO00443 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
PIK3C2AO00443 AC073111.5-205ENST00000641717 521 ntBASIC30.05■■■□□ 2.4
PIK3C2AO00443 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
PIK3C2AO00443 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC30.05■■■□□ 2.4
PIK3C2AO00443 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
PIK3C2AO00443 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC30.05■■■□□ 2.4
PIK3C2AO00443 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC30.05■■■□□ 2.4
PIK3C2AO00443 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC30.05■■■□□ 2.4
PIK3C2AO00443 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
PIK3C2AO00443 HLA-L-209ENST00000420110 1011 ntBASIC30.04■■■□□ 2.4
PIK3C2AO00443 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
PIK3C2AO00443 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC30.04■■■□□ 2.4
PIK3C2AO00443 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC30.04■■■□□ 2.4
PIK3C2AO00443 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
PIK3C2AO00443 AC004854.2-201ENST00000608450 1441 ntBASIC30.04■■■□□ 2.4
PIK3C2AO00443 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
PIK3C2AO00443 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
PIK3C2AO00443 DBI-210ENST00000542275 757 ntTSL 5 BASIC30.04■■■□□ 2.4
PIK3C2AO00443 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC30.04■■■□□ 2.4
PIK3C2AO00443 LINC00543-201ENST00000567234 1845 ntBASIC30.04■■■□□ 2.4
PIK3C2AO00443 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
PIK3C2AO00443 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
PIK3C2AO00443 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC30.03■■■□□ 2.4
PIK3C2AO00443 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
PIK3C2AO00443 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC30.03■■■□□ 2.4
PIK3C2AO00443 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
PIK3C2AO00443 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
PIK3C2AO00443 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC30.02■■■□□ 2.4
PIK3C2AO00443 GALNS-213ENST00000569433 723 ntTSL 3 BASIC30.02■■■□□ 2.4
PIK3C2AO00443 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
PIK3C2AO00443 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.4
PIK3C2AO00443 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.4
PIK3C2AO00443 H19-210ENST00000439725 1929 ntTSL 2 BASIC30.01■■■□□ 2.4
PIK3C2AO00443 AP004607.4-201ENST00000530158 1459 ntBASIC30.01■■■□□ 2.39
PIK3C2AO00443 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
PIK3C2AO00443 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
PIK3C2AO00443 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
PIK3C2AO00443 STX7-201ENST00000367937 1090 ntTSL 5 BASIC30.01■■■□□ 2.39
PIK3C2AO00443 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC30.01■■■□□ 2.39
PIK3C2AO00443 AC137761.2-201ENST00000561729 223 ntBASIC30.01■■■□□ 2.39
PIK3C2AO00443 AC145350.3-201ENST00000569033 163 ntBASIC30.01■■■□□ 2.39
PIK3C2AO00443 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC30.01■■■□□ 2.39
PIK3C2AO00443 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
PIK3C2AO00443 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC30■■■□□ 2.39
PIK3C2AO00443 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
PIK3C2AO00443 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC30■■■□□ 2.39
PIK3C2AO00443 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
PIK3C2AO00443 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC30■■■□□ 2.39
PIK3C2AO00443 WWOX-218ENST00000627394 894 ntTSL 5 BASIC30■■■□□ 2.39
PIK3C2AO00443 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
PIK3C2AO00443 HSCB-202ENST00000398941 955 ntTSL 2 BASIC29.99■■■□□ 2.39
PIK3C2AO00443 AC016769.1-201ENST00000409132 1010 ntBASIC29.99■■■□□ 2.39
PIK3C2AO00443 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
PIK3C2AO00443 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC29.99■■■□□ 2.39
PIK3C2AO00443 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC29.99■■■□□ 2.39
PIK3C2AO00443 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC29.99■■■□□ 2.39
PIK3C2AO00443 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC29.99■■■□□ 2.39
PIK3C2AO00443 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
PIK3C2AO00443 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
PIK3C2AO00443 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
PIK3C2AO00443 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
PIK3C2AO00443 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
PIK3C2AO00443 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
PIK3C2AO00443 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC29.98■■■□□ 2.39
PIK3C2AO00443 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC29.98■■■□□ 2.39
PIK3C2AO00443 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC29.98■■■□□ 2.39
PIK3C2AO00443 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC29.98■■■□□ 2.39
PIK3C2AO00443 EI24-211ENST00000534546 1544 ntTSL 2 BASIC29.98■■■□□ 2.39
PIK3C2AO00443 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
PIK3C2AO00443 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
PIK3C2AO00443 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
PIK3C2AO00443 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC29.98■■■□□ 2.39
PIK3C2AO00443 SMUG1P1-201ENST00000590640 811 ntBASIC29.98■■■□□ 2.39
PIK3C2AO00443 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
PIK3C2AO00443 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
PIK3C2AO00443 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.39
PIK3C2AO00443 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
PIK3C2AO00443 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
PIK3C2AO00443 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
PIK3C2AO00443 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
PIK3C2AO00443 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
PIK3C2AO00443 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
PIK3C2AO00443 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC29.96■■■□□ 2.39
PIK3C2AO00443 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC29.96■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms