Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TNFRSF11BO00300 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.38■□□□□ 0.85
TNFRSF11BO00300 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFRSF11BO00300 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.38■□□□□ 0.85
TNFRSF11BO00300 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
TNFRSF11BO00300 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.38■□□□□ 0.85
TNFRSF11BO00300 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFRSF11BO00300 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.38■□□□□ 0.85
TNFRSF11BO00300 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFRSF11BO00300 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TNFRSF11BO00300 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.38■□□□□ 0.85
TNFRSF11BO00300 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TNFRSF11BO00300 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.38■□□□□ 0.85
TNFRSF11BO00300 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFRSF11BO00300 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFRSF11BO00300 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFRSF11BO00300 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFRSF11BO00300 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFRSF11BO00300 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TNFRSF11BO00300 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TNFRSF11BO00300 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.37■□□□□ 0.85
TNFRSF11BO00300 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFRSF11BO00300 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TNFRSF11BO00300 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.36■□□□□ 0.85
TNFRSF11BO00300 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.36■□□□□ 0.85
TNFRSF11BO00300 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TNFRSF11BO00300 HSD17B1P1-201ENST00000590052 955 ntBASIC20.36■□□□□ 0.85
TNFRSF11BO00300 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.36■□□□□ 0.85
TNFRSF11BO00300 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFRSF11BO00300 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFRSF11BO00300 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.36■□□□□ 0.85
TNFRSF11BO00300 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TNFRSF11BO00300 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.35■□□□□ 0.85
TNFRSF11BO00300 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFRSF11BO00300 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TNFRSF11BO00300 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TNFRSF11BO00300 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFRSF11BO00300 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TNFRSF11BO00300 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TNFRSF11BO00300 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFRSF11BO00300 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.35■□□□□ 0.85
TNFRSF11BO00300 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TNFRSF11BO00300 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.35■□□□□ 0.85
TNFRSF11BO00300 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.35■□□□□ 0.85
TNFRSF11BO00300 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TNFRSF11BO00300 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TNFRSF11BO00300 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TNFRSF11BO00300 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TNFRSF11BO00300 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFRSF11BO00300 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFRSF11BO00300 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF11BO00300 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TNFRSF11BO00300 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF11BO00300 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.34■□□□□ 0.85
TNFRSF11BO00300 AC074183.2-201ENST00000623112 922 ntBASIC20.34■□□□□ 0.85
TNFRSF11BO00300 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF11BO00300 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF11BO00300 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF11BO00300 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF11BO00300 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.34■□□□□ 0.85
TNFRSF11BO00300 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.34■□□□□ 0.85
TNFRSF11BO00300 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF11BO00300 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFRSF11BO00300 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TNFRSF11BO00300 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFRSF11BO00300 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFRSF11BO00300 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.33■□□□□ 0.85
TNFRSF11BO00300 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.33■□□□□ 0.85
TNFRSF11BO00300 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.33■□□□□ 0.85
TNFRSF11BO00300 PVT1_1.1-201ENST00000615125 194 ntBASIC20.33■□□□□ 0.85
TNFRSF11BO00300 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNFRSF11BO00300 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.33■□□□□ 0.84
TNFRSF11BO00300 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.33■□□□□ 0.84
TNFRSF11BO00300 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TNFRSF11BO00300 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNFRSF11BO00300 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNFRSF11BO00300 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
TNFRSF11BO00300 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TNFRSF11BO00300 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF11BO00300 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TNFRSF11BO00300 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF11BO00300 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF11BO00300 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.32■□□□□ 0.84
TNFRSF11BO00300 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF11BO00300 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF11BO00300 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF11BO00300 AL024507.2-201ENST00000606070 2574 ntBASIC20.31■□□□□ 0.84
TNFRSF11BO00300 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF11BO00300 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.31■□□□□ 0.84
TNFRSF11BO00300 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF11BO00300 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TNFRSF11BO00300 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.31■□□□□ 0.84
TNFRSF11BO00300 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF11BO00300 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF11BO00300 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF11BO00300 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF11BO00300 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TNFRSF11BO00300 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.3■□□□□ 0.84
TNFRSF11BO00300 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.3■□□□□ 0.84
TNFRSF11BO00300 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms