Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SIRPB1O00241 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
SIRPB1O00241 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SIRPB1O00241 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SIRPB1O00241 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.6■□□□□ 0.57
SIRPB1O00241 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIRPB1O00241 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIRPB1O00241 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIRPB1O00241 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.6■□□□□ 0.57
SIRPB1O00241 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SIRPB1O00241 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SIRPB1O00241 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SIRPB1O00241 C17orf82-201ENST00000623772 1530 ntBASIC18.59■□□□□ 0.57
SIRPB1O00241 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIRPB1O00241 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SIRPB1O00241 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
SIRPB1O00241 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.59■□□□□ 0.57
SIRPB1O00241 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIRPB1O00241 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SIRPB1O00241 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.59■□□□□ 0.57
SIRPB1O00241 DUX4L4-201ENST00000566884 1269 ntBASIC18.59■□□□□ 0.57
SIRPB1O00241 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.59■□□□□ 0.57
SIRPB1O00241 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SIRPB1O00241 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SIRPB1O00241 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIRPB1O00241 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.59■□□□□ 0.57
SIRPB1O00241 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SIRPB1O00241 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIRPB1O00241 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.59■□□□□ 0.57
SIRPB1O00241 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.59■□□□□ 0.57
SIRPB1O00241 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SIRPB1O00241 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIRPB1O00241 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SIRPB1O00241 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SIRPB1O00241 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SIRPB1O00241 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SIRPB1O00241 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
SIRPB1O00241 EP400NL-214ENST00000641289 2402 ntBASIC18.58■□□□□ 0.57
SIRPB1O00241 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SIRPB1O00241 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SIRPB1O00241 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIRPB1O00241 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.58■□□□□ 0.56
SIRPB1O00241 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.58■□□□□ 0.56
SIRPB1O00241 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.58■□□□□ 0.56
SIRPB1O00241 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.58■□□□□ 0.56
SIRPB1O00241 AL117332.1-201ENST00000622628 974 ntBASIC18.58■□□□□ 0.56
SIRPB1O00241 AC009086.3-201ENST00000623486 1008 ntBASIC18.58■□□□□ 0.56
SIRPB1O00241 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SIRPB1O00241 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIRPB1O00241 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIRPB1O00241 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIRPB1O00241 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.58■□□□□ 0.56
SIRPB1O00241 ESRRAP2-201ENST00000418437 1549 ntBASIC18.58■□□□□ 0.56
SIRPB1O00241 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIRPB1O00241 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIRPB1O00241 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SIRPB1O00241 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SIRPB1O00241 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIRPB1O00241 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.57■□□□□ 0.56
SIRPB1O00241 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIRPB1O00241 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIRPB1O00241 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
SIRPB1O00241 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SIRPB1O00241 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIRPB1O00241 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SIRPB1O00241 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.56■□□□□ 0.56
SIRPB1O00241 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIRPB1O00241 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIRPB1O00241 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SIRPB1O00241 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIRPB1O00241 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIRPB1O00241 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SIRPB1O00241 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
SIRPB1O00241 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SIRPB1O00241 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIRPB1O00241 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIRPB1O00241 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SIRPB1O00241 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SIRPB1O00241 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIRPB1O00241 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SIRPB1O00241 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SIRPB1O00241 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.55■□□□□ 0.56
SIRPB1O00241 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SIRPB1O00241 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.55■□□□□ 0.56
SIRPB1O00241 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIRPB1O00241 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SIRPB1O00241 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIRPB1O00241 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.55■□□□□ 0.56
SIRPB1O00241 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.55■□□□□ 0.56
SIRPB1O00241 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SIRPB1O00241 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SIRPB1O00241 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIRPB1O00241 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
SIRPB1O00241 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIRPB1O00241 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIRPB1O00241 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SIRPB1O00241 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
SIRPB1O00241 AC004687.1-201ENST00000579003 1625 ntBASIC18.54■□□□□ 0.56
SIRPB1O00241 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.54■□□□□ 0.56
SIRPB1O00241 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms